Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3345 |
Symbol | |
ID | 6126080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 193329 |
End bp | 194036 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641650455 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_001776990 |
Protein GI | 170735730 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCCC CCACGATCCT CACGCCGCGC GACTGGCCGT CGCATCCGGC CTATGTCCAC CCCGAGTACC GTTCGTCCGT GAAGCGCGGC CCGACCCGCC CGCTGATCCC GCTGAAGGAA AAACTCCGCG ACCAGTACGC GCCCGTCTAC GGCGCGGAAG ATCTCGGCGC GCTCGACCAC GACCTGACGA AGAACGCCGT GAAGAACGGC GAGCCGCTCG GCGAGCGGAT GGTCGTCACC GGCCGCGTGC TCGACGAAGG CGGCAAGCCC GTGCGCAACA CGCTCGTCGA GGTGTGGCAG GCCAACGCGG CCGGCCGCTA CGTGCACAAG GTCGACCAGC ACGACGCGCC GCTCGACCCG AACTTCCTCG GCGCGGGCCG CTGCCTGACC GACGACGAAG GCCGCTACCG CTTCCTGACG ATCAAGCCCG GCGCGTATCC GTGGGGCAAC CATCCGAACG CGTGGCGCCC GAATCACATC CACTTCTCGC TGTTCGGCGA TTACTTCGGC TCGCGTCTCG TCACGCAGAT GTACTTCCCC GGCGATCCGC TGCTCGCGTA CGACCCGATC TTCCAGGGCA CGCCGGAAGC CGCGCGCGAG CGCCTGATCT CGCGCTTCTC GATGGACATC ACCGAAGAAG GCTATGCGCT CGGCTACGAA TTCGACATCG TGCTGCGCGG CCGCGACGCC ACCCCGATGG AGCGCTGA
|
Protein sequence | MDSPTILTPR DWPSHPAYVH PEYRSSVKRG PTRPLIPLKE KLRDQYAPVY GAEDLGALDH DLTKNAVKNG EPLGERMVVT GRVLDEGGKP VRNTLVEVWQ ANAAGRYVHK VDQHDAPLDP NFLGAGRCLT DDEGRYRFLT IKPGAYPWGN HPNAWRPNHI HFSLFGDYFG SRLVTQMYFP GDPLLAYDPI FQGTPEAARE RLISRFSMDI TEEGYALGYE FDIVLRGRDA TPMER
|
| |