Gene Bcenmc03_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3319 
Symbol 
ID6126054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp159933 
End bp161084 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID641650429 
Productpolysaccharide export protein 
Protein accessionYP_001776964 
Protein GI170735704 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00116836 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGC TGCGCGTTGC GATGGCGGCG ACCGTGTGTG TGCTGAATGC CTGCGCATTT 
GCGCCGGGCA TGACATATCA GGCGCCGGCC GAACGCGATG CGAATGCGCG CGTGAGCGTT
GCGGCGACGG GGTCGGGGGG ACTCGACGGG GTGCAGAACG TGTCCAGCGA AGACCTGATC
GAGATCACGC CTGCGTTCGT CGAACAACAG CATGCCGCGC GCTCTGCCGG CGTCGACGCC
GAAATCCGGC AACTGTTCGG TACGCCAAAG GCATACGTGA TCGGCCCGGG CGATGTGCTG
AACATCGTCG TCTGGGATCA CCCGGAACTG AACCTGCCGA CGGCGCAGGC GACGAATGGC
GACAATATCG GCACCAACTC GGTTGTGGCG GGGTACACGG TGGACGCGGG CGGTAACGTT
CAGTTCGCGC AAGCAGGCCT CGTACACGTG GCCGGGCTCA CCGAGGCGGA GGCGCGTGCC
GCGGTGACCC GGCGGCTGGG CGAGTACGTG CGCAAACCGC AGATTGCGCT GCGTATCCAG
GCGTATCGCA GCAAGCGAGT TTATCTCGAC GGCGAAGTGC GCACGCCGGG GCTGCAGATC
GTGAACGACA TGCCGATGAC GTTGCCCGAG GCGATCGATC GCGCGGGCGG CTTCACGGCC
GGAGCCGACC GGTCGCAGGT CACGGTGACG CGCGGCGGCA AGACGGTGAA CGTGAGTTTG
CCGGCCATGA TCGCCGCGGG TATCAATCCG TCCAATATCC TGTTGCGCGA CGGCGATCTC
GTGCGAGTGC GTCCGACGAG CGAAGCGAAG GTCTTCGTAC TCGGCGAAGT GTCACGCCCG
GCGACGCTGA CGTTGACCGA CGGACGGATC AGCCTCGGTG AAGCGCTTGG CGAGACCGGC
GGCGTCAGTC AGTACACGTC TGACGCGCGG CAGATCTACG TGGTGCGCCG CGGGCCGGGG
AACCGGCCGC AGGTCTATCA CCTGGACGGT CGCGCGCCGG CCTCCTATGC GTTGGCCGAT
CAGTTTCCGC TCGAGCGTCG CGACGTCGTC TTCGTCGATG CGTCGTCGCT GGTGCGCTGG
AGCCGCGTCG TGAATTTGCT GATTCCGTCC GCGGCGCAGG GCGCGCTCAC GGCCCGGGCC
GTGACGCCGT GA
 
Protein sequence
MPRLRVAMAA TVCVLNACAF APGMTYQAPA ERDANARVSV AATGSGGLDG VQNVSSEDLI 
EITPAFVEQQ HAARSAGVDA EIRQLFGTPK AYVIGPGDVL NIVVWDHPEL NLPTAQATNG
DNIGTNSVVA GYTVDAGGNV QFAQAGLVHV AGLTEAEARA AVTRRLGEYV RKPQIALRIQ
AYRSKRVYLD GEVRTPGLQI VNDMPMTLPE AIDRAGGFTA GADRSQVTVT RGGKTVNVSL
PAMIAAGINP SNILLRDGDL VRVRPTSEAK VFVLGEVSRP ATLTLTDGRI SLGEALGETG
GVSQYTSDAR QIYVVRRGPG NRPQVYHLDG RAPASYALAD QFPLERRDVV FVDASSLVRW
SRVVNLLIPS AAQGALTARA VTP