Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3319 |
Symbol | |
ID | 6126054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 159933 |
End bp | 161084 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641650429 |
Product | polysaccharide export protein |
Protein accession | YP_001776964 |
Protein GI | 170735704 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00116836 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGGC TGCGCGTTGC GATGGCGGCG ACCGTGTGTG TGCTGAATGC CTGCGCATTT GCGCCGGGCA TGACATATCA GGCGCCGGCC GAACGCGATG CGAATGCGCG CGTGAGCGTT GCGGCGACGG GGTCGGGGGG ACTCGACGGG GTGCAGAACG TGTCCAGCGA AGACCTGATC GAGATCACGC CTGCGTTCGT CGAACAACAG CATGCCGCGC GCTCTGCCGG CGTCGACGCC GAAATCCGGC AACTGTTCGG TACGCCAAAG GCATACGTGA TCGGCCCGGG CGATGTGCTG AACATCGTCG TCTGGGATCA CCCGGAACTG AACCTGCCGA CGGCGCAGGC GACGAATGGC GACAATATCG GCACCAACTC GGTTGTGGCG GGGTACACGG TGGACGCGGG CGGTAACGTT CAGTTCGCGC AAGCAGGCCT CGTACACGTG GCCGGGCTCA CCGAGGCGGA GGCGCGTGCC GCGGTGACCC GGCGGCTGGG CGAGTACGTG CGCAAACCGC AGATTGCGCT GCGTATCCAG GCGTATCGCA GCAAGCGAGT TTATCTCGAC GGCGAAGTGC GCACGCCGGG GCTGCAGATC GTGAACGACA TGCCGATGAC GTTGCCCGAG GCGATCGATC GCGCGGGCGG CTTCACGGCC GGAGCCGACC GGTCGCAGGT CACGGTGACG CGCGGCGGCA AGACGGTGAA CGTGAGTTTG CCGGCCATGA TCGCCGCGGG TATCAATCCG TCCAATATCC TGTTGCGCGA CGGCGATCTC GTGCGAGTGC GTCCGACGAG CGAAGCGAAG GTCTTCGTAC TCGGCGAAGT GTCACGCCCG GCGACGCTGA CGTTGACCGA CGGACGGATC AGCCTCGGTG AAGCGCTTGG CGAGACCGGC GGCGTCAGTC AGTACACGTC TGACGCGCGG CAGATCTACG TGGTGCGCCG CGGGCCGGGG AACCGGCCGC AGGTCTATCA CCTGGACGGT CGCGCGCCGG CCTCCTATGC GTTGGCCGAT CAGTTTCCGC TCGAGCGTCG CGACGTCGTC TTCGTCGATG CGTCGTCGCT GGTGCGCTGG AGCCGCGTCG TGAATTTGCT GATTCCGTCC GCGGCGCAGG GCGCGCTCAC GGCCCGGGCC GTGACGCCGT GA
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Protein sequence | MPRLRVAMAA TVCVLNACAF APGMTYQAPA ERDANARVSV AATGSGGLDG VQNVSSEDLI EITPAFVEQQ HAARSAGVDA EIRQLFGTPK AYVIGPGDVL NIVVWDHPEL NLPTAQATNG DNIGTNSVVA GYTVDAGGNV QFAQAGLVHV AGLTEAEARA AVTRRLGEYV RKPQIALRIQ AYRSKRVYLD GEVRTPGLQI VNDMPMTLPE AIDRAGGFTA GADRSQVTVT RGGKTVNVSL PAMIAAGINP SNILLRDGDL VRVRPTSEAK VFVLGEVSRP ATLTLTDGRI SLGEALGETG GVSQYTSDAR QIYVVRRGPG NRPQVYHLDG RAPASYALAD QFPLERRDVV FVDASSLVRW SRVVNLLIPS AAQGALTARA VTP
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