Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3275 |
Symbol | |
ID | 6126254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 105022 |
End bp | 106089 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641650386 |
Product | ABC transporter related |
Protein accession | YP_001776921 |
Protein GI | 170735661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0100631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.197934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC TCATCGTCGA CGATCTGCAC CTCAGCTACG GCGCCAACCC GATCCTCAAG GGCGTGTCGT TCGAACTGAA GGCCGGCGAA GTCGTGTGCC TGCTCGGCGC GTCGGGCAGC GGCAAGACCA CGCTGCTGCG TGCGGTGGCC GGCCTCGAAC AGCCGTCCAA CGGGGGCATC CAGCTCGACG ACCGCGTGTT CTTCGACGGC GCTCGGCGCG TCGACCTGCC GGTCGAACAG CGCTCGCTCG GCCTCGTGTT CCAGTCGTAC GCGCTGTGGC CGCACCGCAC CGTCGCCGAC AACGTCGGCT ATGGCCTCAA GCTGCGCCGT GTCGCACCGG CCGAACAGAA GCGCCGCGTG CAGACCGCGC TCGACCAGCT CGGCCTCGGC CATCTCGCCG AACGCTTTCC GCATCAGCTG TCGGGCGGCC AGCAGCAGCG CGTCGCGATT GCCCGCGCGC TCGTCTACAA CCCGCCGGTG ATCCTGCTCG ACGAGCCGCT GTCGAACCTC GACGCGAAGC TGCGCGAGGA AGCGCGTGCG TGGCTGCGCG AGCTGATCGT GTCGCTCGGG CTGTCGGCCC TGTGCGTGAC GCACGACCAG ACCGAAGCGA TGGCGATGTC CGATCGCATC CTGCTGCTGC GCAACGGCCG CATCGAGCAG GAAGGCACAC CGGCCGAGCT GTACGGCGCG CCGCGCTCGC TGTACACCGC CGAATTCATG GGCAGCAACA ACCGGATCGA CGCGCGCGTC GCCGCGATCG ACGGCGAATG CGTGACGCTC GCCGGCGACG GCTGGCAACT GCAGGCGCTT GCCCGCGACA CGCTGGCACC CGGCCAGGAC GCCCAGGCCG TGATTCGCCT CGAACGCGTG CAGGTCACTG ACGGCCCGGG CGCGAACCGC CTGCAGGCCG ACCTCGTCAC GTCGATGTAT CTCGGCGATC GCTGGGAGTA CCTGTTCCAT TGCGGCGAAA TGCGCCTGCG TGCGTTCGGC CATGTACCGC GCGCGGCCGG CAAGCACTGG ATCGAATTCC CGACCAACGA CTGCTGGGCG TTCGCGAAAG CGGGCTGA
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Protein sequence | MDKLIVDDLH LSYGANPILK GVSFELKAGE VVCLLGASGS GKTTLLRAVA GLEQPSNGGI QLDDRVFFDG ARRVDLPVEQ RSLGLVFQSY ALWPHRTVAD NVGYGLKLRR VAPAEQKRRV QTALDQLGLG HLAERFPHQL SGGQQQRVAI ARALVYNPPV ILLDEPLSNL DAKLREEARA WLRELIVSLG LSALCVTHDQ TEAMAMSDRI LLLRNGRIEQ EGTPAELYGA PRSLYTAEFM GSNNRIDARV AAIDGECVTL AGDGWQLQAL ARDTLAPGQD AQAVIRLERV QVTDGPGANR LQADLVTSMY LGDRWEYLFH CGEMRLRAFG HVPRAAGKHW IEFPTNDCWA FAKAG
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