| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2298 |
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| Symbol | |
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| ID | 6120062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2444335 |
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| End bp | 2448777 |
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| Gene Length | 4443 bp |
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| Protein Length | 1480 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641650232 |
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| Product | hemolysin-type calcium binding protein |
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| Protein accession | YP_001776772 |
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| Protein GI | 170731339 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.880239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAT ATGAAAGTCT TTATAACCGT TACATGCAAG AGGCTAATAG ATACGCAACG
TATTACGGAC TTGATCCTAG CACTGCACAT AATGGTGAAT GGGATGCTTT TCGTCATGCC
TACGCCAGTG GAGCGATGAC TCGGGAATAT GGTGAAACAG CAGCTCATCT TTTTGGAGAT
TTGAATGAGA TACGCGGCGA TTTCATTCAT AACCAGCCTG AATATGAAAA GAATATGGAT
AAATGGAATA ACTCTGTTGG CCGTAATATT GGGAAGGATG CTGCAAGTAG CGACGAGATT
GCACGTCGCA TATACGATGC AATGAAGCGA GGTCACCTCA TTACAGACCC TTGGAATGAT
ACCCGTCGCT ATAACGAAAG AAATCAACCA GGTAAAGGAA ACAACCGTGA TGCTCTTGGC
GACAGCGTAG GCAGCAACAG CCACGGGACA GGGGCTGCGG GTGGCCCAGG GGCAGGTGGT
GCCAGTGTTA GCAAACGGAT CACTCCGCTC CCGCCGCGCG ATCCGCTGGC GTTGGATTTG
GACGGTGACG GGATCGAAAC GACAGGCAGT GATGGCCGGG TCATTCTGTT CGACCACGAT
GCCGATGGGG TCAAGACCGG CACCGGTTGG CTGAAGCCGG ACGATGGTTG GTTGGTGCTG
GACCGTAACG GTAACGGGAC GATCGATTCC GGGCGTGAGC TGTTCGGCAC CGATACCGTG
AAACGCAACG GCCAATTGGC CACAGATGGC TTTGATGCGT TGCGCGATGT CGATAGTAAT
CAGGATGGCA AGATCGACGC GGCTGATCGT GTTTTCGCCA ATCTGCGGAT TTGGCGGGAT
CTGAATCAAG ACGGCATCAG TCAGGCGAAT GAACTCAGTA CGCTGGATGC GAATCACATT
GTTTCGATTG GGGTGACGGC AACGGCAGGG CGTGTTGATC TGGGGAACGG CAATGTGCAG
ACGGCGGCGG GGGCGTTTAC CCGTTCCAAC AGTACGACGG GGGCCACCGA GGGCACCACT
GGCACTGCCG CGAATCTGGA TTTGCTGGCT GACACGTTCT ATCGGGATTT CACGCAACAG
GTTGCGTTGA CGGATCAGGC TAAGGCGCTG CCTTTTTTAC GCGGCTCCGG GCGGGTGCGC
AATCTGGACG AGGCGATCAG CCTGTCCAAG GATTTGGGCG ATTGGGTACA GAGTTATAGT
CAGCAATCCA CGCGGCAAGC GCAGCTGGAT CGGCTGGATG GTTTGATGGA GAAATGGGCC
AACACTTCGG ACATGCAGTC TCTGCGGGCG CAAGCGGAGG CACTCGCCTC CAAGGGCGTC
ACAGTGACTT ATGTGTTGTC TGGATTAAAC CCGGGCACAG CGGCTTATCA GAATTTCTTG
CGCAAGCTGG ACATTGTGGA GCGCTTCATG GGGTTCACTT ACGGGGGTAA GCAAGGGGAG
GCACGTTTTA CGCCCTTGGA TGCCACGTCT GGCACGATGA CCGTGAGTTT GTCAGATGCT
CAGGTGACCA ATATTGCATT GGCGTATGAG CGGTTCAAAA CGGATATTTA TGAATCGCTG
CTGCTGAAAA CCAGGATGGA ACCCATCTAC AACCTGGCGG AGGAGGATTT TGTCAATGGC
GCCTGGGTCA TGGACTGGAG CGGTGTAGAA CGGGCGCTCA AACAGGGGAT TCAGCGTCAT
CCACGGGATG GGATATTGGA TGCCATTGAG TTTGTGAGTG CTCTCGGATA CAAGACCGCC
GAACGCCTGG GGTGGAACGC GATCGGTTTT CTCGCCGACC AACTCAGTGC AACGCCAGAT
ATGGAAGGAT TCAACCGTGA ATCCAGCAGT TGGACGGTGA TCCTTTACGC CGCCAATGAA
CATTATCTTC CTGGTACCTT GGGCTCGGAT TTGCTGGTAG GGACATCAGG GAATGACTTG
ATCAGGGGAG GTGGTAATGG TGAAGGCAAC GATGTACTGA TTGGGAAAGG TGGGAACGAC
GAGCTCAGCG GTGGACTTGG GGACGATATC CTGGACGGCG GTACCGGCAA TGACGTGCTC
TACGGCGGCA CCGGTAACGA TACGTATCGG TTCGCCATCG GTGCCGGCGT GGACCGGATC
GAAGACAGCG ACAGTACCCC TGGCAATACC GATGTGGTGA GGTTTGCCGA TGTGGCATCC
ACCGCATTGA CTGCGTTGGA GCGTAAGGAC AATGACCTGG TGATCAAGTA CGGCACTGGC
GACCAACTGA CCATCAGCAG TTATTTCCAC CCCGGCTTCT CGGATGCCAA GATTGAACAA
TTCATGTTCA GCGACGGGGT GACCTGGGAT GAAGCAGCCA TCAAAGCCCG TGTTATCAGC
AACGGCGACG CCAGCAACAA CACCATCATC GGCTACAAAG ACGGCAGTAA CCGTATTTAT
GGCCTGGATG GCAATGACGA AATCTATGGG GGCGCATTGG CCGACATCCT GGACGGCGGT
GCAGGGAACG ACATGCTCAG CGGCGGCGGC GGTGCAGACA CGCTGGACGG CGGTAGCGGC
AATGACACGC TCAACGGTGG CACCGGTAAC GATACGTACC GGTTCGCCAT CGGTGTCGGC
GTGGACCGGA TCGAAGACAG CGACAGTACG CCTGGCAATA CCGATGTGGT GAGGTTTGCC
GATGTGGCAT CCACCGCACT GACTGCGTTG GAGCGTAAGG ACAATGACCT GGTGATCAAG
TACGGCACTG GCGATCAACT GACCATAAGC AACTATTTCT ATTCCGCAGA GTACAAGGTC
GAGCAGTTCA CGTTCAGTGA CGGTGTTACC TGGGATGAAG CGGCCATCAA AGCCCGTGTT
ATCACCAACG GGGATGCCAG TAACAACTAT CTCCGCGGCT ACAACGACGG CAGTAACCGT
ATTTATGGCC TGGATGGCAA TGACACCATC TATGGGGGCG CATTGGCCGA CATCCTGGAC
GGTGGACATA GTGATGACAC GTTGATCGGC AATGCTGGGG ACGACACTCT GTTTGGTGGC
ACAGGGAACG ACATGCTCAG CGGCGGCAAA GGTGCAGACA CGCTGGACGG TGGTAGCGGC
AATGACACGC TCAACGGTGG CACCGGTAAC GATACGTATC GGTTCGCCAT CGGTGTCGGC
GTGGACCGGA TCGAAGACAG CGACAGTACG CCTGGCAATA CCGATGTGGT GAGGTTTGCC
GATGTGGCAT CCACCGCACT GACTGCGTTG GAGCGTAAGG ACAATGACCT GGTGATCAAG
TACGGCACTG GCGATCAACT GACCGTGATC GAGTACTTTA ACCCTAACTA CTCGGGCTAC
AAGATCGAGC AGTTCACGTT CAGTGACGGG GTAACCTGGG ATGAAGCGGC CATCAAAGCC
CGTGTTATCA CCAACGGGGA TGCCAGTAAC AACTATCTCC GCGGCTACAA CGACGGCAGT
AACCGTATTT ATGGCCTGGA TGGCAATGAC GAAATCTATG GGGGCGCACT GAACGATATG
CTCTACGGCG GTGCAGGAAA CGACATGCTC AGCGGCGGCA AAGGTGCAGA CACGCTGGAC
GGTGGTAGCG GTAATGACGT GCTCTACGGC GGCACCGGTA ACGATATGTA TCGGTTCGCC
ATCGGTGCTG GGGTGGATCG GATCGAAGAG AGCGACACCA CCGCAGGCAA TACCGATGTG
GTGAGGTTTG CCGATGTCGC TTCCACTGCG CTAACCGCGC TGGAACGTAA GGACAGTGAC
TTGGTAATCA AGTACGGCAC TAGCGATCAA CTGACCATAA GCAACTATTT CTATTCCGCA
GAGTACAAGG TCGAGCAGTT CACGTTCAGT GACGGGGTAA CCTGGGATGA AGCGGCCATC
AAAGCCCGTG TTATCACCAA CGGGGATGCC AGTAACAACT ATCTCCGCGG CTACAACGAC
GGCAGTAACC GTATTTATGG CCTGGATGGC AATGACGAAA TCTATGGGGG CGCACTGGAC
GATATGCTCT ACGGCGGTGC AGGAAACGAC ATGCTCAGCG GCGGCAAAGG TGCAGACACG
CTGGACGGTG GTAGCGGTAA TGACGTGCTC TACGGCGGCA CCGGTAACGA TATGTATCGG
TTCGCCATCG GTGCTGGGGT GGATCGGATC GAAGACTACG ACACCACTAC TGGCAATGCA
GATGTGCTTT CCATCGGTCA GGGGGTAAGC ATCAATCAGC TTTGGTTCCA ACATGTCGGT
AACGATCTGG AAGTCAGCAT CATTGGTACG GGGGATCAGA TAACGATCAG GGACTGGTAC
TCCAATGCGG CATACCATGT CGAGCAGTTC AAGACATCCG ATGGCAAGGT GCTGCGCGAT
AGCCAAGTGA ATGCGCTGGT CTCAGCGATG GCCGGCTTTG CACCGCCAGT ACTTGGTCAA
ACGTCGTTGT CTACCGATTA TCAGAAGGCA TTGAATCCGC TGATTGCCGC GCACTGGAAG
TAA
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| Protein sequence | MNGYESLYNR YMQEANRYAT YYGLDPSTAH NGEWDAFRHA YASGAMTREY GETAAHLFGD
LNEIRGDFIH NQPEYEKNMD KWNNSVGRNI GKDAASSDEI ARRIYDAMKR GHLITDPWND
TRRYNERNQP GKGNNRDALG DSVGSNSHGT GAAGGPGAGG ASVSKRITPL PPRDPLALDL
DGDGIETTGS DGRVILFDHD ADGVKTGTGW LKPDDGWLVL DRNGNGTIDS GRELFGTDTV
KRNGQLATDG FDALRDVDSN QDGKIDAADR VFANLRIWRD LNQDGISQAN ELSTLDANHI
VSIGVTATAG RVDLGNGNVQ TAAGAFTRSN STTGATEGTT GTAANLDLLA DTFYRDFTQQ
VALTDQAKAL PFLRGSGRVR NLDEAISLSK DLGDWVQSYS QQSTRQAQLD RLDGLMEKWA
NTSDMQSLRA QAEALASKGV TVTYVLSGLN PGTAAYQNFL RKLDIVERFM GFTYGGKQGE
ARFTPLDATS GTMTVSLSDA QVTNIALAYE RFKTDIYESL LLKTRMEPIY NLAEEDFVNG
AWVMDWSGVE RALKQGIQRH PRDGILDAIE FVSALGYKTA ERLGWNAIGF LADQLSATPD
MEGFNRESSS WTVILYAANE HYLPGTLGSD LLVGTSGNDL IRGGGNGEGN DVLIGKGGND
ELSGGLGDDI LDGGTGNDVL YGGTGNDTYR FAIGAGVDRI EDSDSTPGNT DVVRFADVAS
TALTALERKD NDLVIKYGTG DQLTISSYFH PGFSDAKIEQ FMFSDGVTWD EAAIKARVIS
NGDASNNTII GYKDGSNRIY GLDGNDEIYG GALADILDGG AGNDMLSGGG GADTLDGGSG
NDTLNGGTGN DTYRFAIGVG VDRIEDSDST PGNTDVVRFA DVASTALTAL ERKDNDLVIK
YGTGDQLTIS NYFYSAEYKV EQFTFSDGVT WDEAAIKARV ITNGDASNNY LRGYNDGSNR
IYGLDGNDTI YGGALADILD GGHSDDTLIG NAGDDTLFGG TGNDMLSGGK GADTLDGGSG
NDTLNGGTGN DTYRFAIGVG VDRIEDSDST PGNTDVVRFA DVASTALTAL ERKDNDLVIK
YGTGDQLTVI EYFNPNYSGY KIEQFTFSDG VTWDEAAIKA RVITNGDASN NYLRGYNDGS
NRIYGLDGND EIYGGALNDM LYGGAGNDML SGGKGADTLD GGSGNDVLYG GTGNDMYRFA
IGAGVDRIEE SDTTAGNTDV VRFADVASTA LTALERKDSD LVIKYGTSDQ LTISNYFYSA
EYKVEQFTFS DGVTWDEAAI KARVITNGDA SNNYLRGYND GSNRIYGLDG NDEIYGGALD
DMLYGGAGND MLSGGKGADT LDGGSGNDVL YGGTGNDMYR FAIGAGVDRI EDYDTTTGNA
DVLSIGQGVS INQLWFQHVG NDLEVSIIGT GDQITIRDWY SNAAYHVEQF KTSDGKVLRD
SQVNALVSAM AGFAPPVLGQ TSLSTDYQKA LNPLIAAHWK
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