| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2262 |
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| Symbol | |
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| ID | 6120025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2399814 |
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| End bp | 2401634 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641650201 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_001776741 |
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| Protein GI | 170731308 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCG CCCCCCGTCT TCGCAAAAAC ATATCCCGCA AAGACACTAA AACCGCACCC
CTGACACACA GACTGACCCT GCTGCTCACC CTACTACCAC TCCCCTTATT CGCAGCCGCA
CCACCGCCAG CAACCACTAA CTCTCCCGAA CAAATCGATC AACAGTGGCT ACAAGCCACG
GCCCACTACG CACCGGAACG CGACCACCTC GTACACATTG CACACCATGG TGCGGCACAC
GGACCATTCC GCCCCGACTG GCCATCACTG AAACAGTACC GCTCCCCCGA TTGGTACAAC
AATGCCAAAT TTGGCATCTT CATCCACTGG GGCGTCTTCT CCGTTCCCGC ATTTGGCAGT
GAATGGTACT CACGCAACAT GTATCAACAG GGATCGAAAG AATATCAACA CCACCTAGCC
ACCTATGGCC CACAAAACAC ATTCGGCTAC AAAGACTTCA TCCCCCAGTT CACCGCATCC
ACATTCGACC CAAACGCATG GGCCACACTC TTCAAACAAG CAGGTGCCCG CTATGTCGTC
CCAGTGGCCG AACACCATGA TGGATTTGCC TTGTACGACT CCCACCTCTC GGACTGGACC
GCAGTCAAGA CCGGCCCCAA ACGCGACCTA CTCGGCGAAC TCTCCACAGC GATTCGAGCC
CAAGGCCTAC ACTTCGGCTT ATCCTCCCAC CGCGCCGAAC ACAATTGGTT TTTTGACGGA
GGCCGTCAAT TTGATTCCGA TATCAATGAC CCACACTACG CCGACTTATA CGGCCCAGCG
CAGATACGCT TAGCAGGAAA AACTGACGAA GACGTCGCCA ACGACTGGAC ACCCGTTTCC
CAAGCCTGGC TCAACGACTG GTTAGCACGC ACGACAGAAC TCATCGACCG CTATTCCCCT
GAACTCATCT ATTTTGATTG GTGGATCGCA CACCCAGCCT TTCGCAACAC ACTACCCACC
CTGCTGGCTT ACTACTACAA CCACGGCCAA ACAAAAAACA CCTGTCATGC CCCCCCTCAC
CACACACCGT CCACCGCCCC ATCACCGCCT ACCCCCATCA CCGCAACACA CCTGACCTCC
ACCACCACAC AACCGCAATG TGGCGTCGTA GTGAACTACA AACTCGGCGC CCTCCCCGAT
GGAGTCGGCA CCTTAGACAT CGAACGCGGC CAACTCACCG GCATCCACCC CACCCACTGG
CAAACCGACA CCTCAATCAG CAACGCCTCC TGGGGATACA TTGAAAACGA CACCTATAAA
TCACCCACCT TCATCATCCA CATGCTGGCC GACGTCGTCG CCAAAAACGG CAACTTACTC
CTCAACATCG GCCCACGCGC CGATGGCAGC ATCCCGGATG CCGAGCGCAC CATCCTGCTC
AACATCGGCA AATGGCTGAA CATCAACGGC ACAGCCATCT ACGATACGCA CCCCTGGCGC
ACCTATGGCG AAGGTCCAAC GGAAGTCGCT GGTGGCACCT TTCAAGACAC CAAAACAAAA
CCCTATACCG CCGAAGACTT CCGCTTCACC GTGCACGGCG ACACCCTATA CGCCATCGAA
TTAGGCTGGC CGACAAACGG CCAAACCGTG ATTCACTCCA TCAACGCATC CGACAACGTC
TACAGCGTGA CACTGCTCGC AGACAATCGC CCAATCCCAT TTGAGCAACA CAACGACGGC
CTCCACCTGC ATTTGCCGAA CAAACCTGTG GGCGAACATG CCTACGTCTT CCGTATCACC
ACACACACAC CCATTAACCC ATCTTCGCCC CACGCACACC TTGACATTGC GATCTACCCA
TTCAAATTCA TCATTCCTTA A
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| Protein sequence | MTLAPRLRKN ISRKDTKTAP LTHRLTLLLT LLPLPLFAAA PPPATTNSPE QIDQQWLQAT
AHYAPERDHL VHIAHHGAAH GPFRPDWPSL KQYRSPDWYN NAKFGIFIHW GVFSVPAFGS
EWYSRNMYQQ GSKEYQHHLA TYGPQNTFGY KDFIPQFTAS TFDPNAWATL FKQAGARYVV
PVAEHHDGFA LYDSHLSDWT AVKTGPKRDL LGELSTAIRA QGLHFGLSSH RAEHNWFFDG
GRQFDSDIND PHYADLYGPA QIRLAGKTDE DVANDWTPVS QAWLNDWLAR TTELIDRYSP
ELIYFDWWIA HPAFRNTLPT LLAYYYNHGQ TKNTCHAPPH HTPSTAPSPP TPITATHLTS
TTTQPQCGVV VNYKLGALPD GVGTLDIERG QLTGIHPTHW QTDTSISNAS WGYIENDTYK
SPTFIIHMLA DVVAKNGNLL LNIGPRADGS IPDAERTILL NIGKWLNING TAIYDTHPWR
TYGEGPTEVA GGTFQDTKTK PYTAEDFRFT VHGDTLYAIE LGWPTNGQTV IHSINASDNV
YSVTLLADNR PIPFEQHNDG LHLHLPNKPV GEHAYVFRIT THTPINPSSP HAHLDIAIYP
FKFIIP
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