Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2249 |
Symbol | |
ID | 6120865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2378394 |
End bp | 2380625 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641650189 |
Product | isocitrate dehydrogenase (NADP(+)) |
Protein accession | YP_001776729 |
Protein GI | 170731296 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.267042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGTA CGCCCAAGCT TATTTATACA CTTACAGACG AGGCGCCGTT CTTGGCAACG CAGTCGCTAT TGCCAATTAT CAAGGCTTAC ACCAAGGTTG CTGGTATCCA GGTTGAGACA CGTGATATTT CTTTGGCCGG GCGTATCTTG GCGCAGTTTC CTGATGTGTT GACCGAGACG CAAAGAGTCA GTGACGATCT GGCTGAGTTG GGGGAAATGA CGGCTAGTCC GGATGCCAAC ATTATTAAGT TGCCTAATAT CAGTGCTTCA ATGCCGCAGT TAAAGGCTGC TATCAAAGAG TTGCAGGAGC AGGGCTATTT GTTGCCGGAT TATCCGGATG AACCAAAAAA TAGTGCGCAA AAGGATGTCA AGATGCGCTA TGACAGGGTG AAGGGTAGTG CGGTCAATCC CGTACTACGT GAAGGCAATT CTGATCGCCG TGCCCCGTTG TCAGTGAAGA ATTATGTGCG TAAGTATCCG CATCGGATGG GGGCGTGGAG TACTACATCC AAGTCGCATG TCGCACATAT GGATGGCGGT GATTTTTTTG GTAGTGAACG TTCGGCTGTA CTCGCTCAGG CTGGTATGTT GAAGGTCGAG CTGATTGCTA AGGATGGCAC GGTGACGGTA CTCAAGGATA AGGTTGCAGT GAGTGCCGGT GATATTGTGG ATGCTGCGGT GCTGAGTAAG CAGGCATTGG CTGTGTTTGT TGCTGCACAG ATGAATGATG CGAAGTCACA GGGGGTGCTG TTTTCGGTAC ACCTGAAGGC GACGATGATG AAGGTGTCCG ATCCGGTGAT ATTTGGGGTG TTTGTTTCAG AGTTCTACAA AGAGGCTTTG GCCAAGCATG CTGACACGTT GAAACAGGTC GGTTTTGATC CTAACAATGG TATTGGCGAT TTGTACGCAC GCATTGTTGC GTTGCCGGAG GAGATGCAGG CAGTCATCAG GGCTGATGTG CAGGCTCAGT ATGCCAAACG TCCTGGTTTG GCGATGGTTA ATTCGGGCAA GGGGATCACT AATTTGCATG TGCCTAGTGA TGTGATTGTG GATGCGTCGA TGCCGGCGAT GATCCGTAGT TCTGGGCAGA TGTGGAACGT TGCAGGCACG CTCCAAGACA CTAAAGCAGT GATTCCGGAT CGTTGTTATG CCGGCGTGTA TAAAACTGTC ATTAATGATT GCAAGTTACA CGGTGCTTTT GATCCAATGA CGATGGGTTC GGTGCCCAAT GTCGGTTTGA TGGCGCAGAA GGCTGAGGAA TATGGTTCGC ACGACAAAAC GTTTCAGGTA CAGAGTGTGG GTGTAGTCCG TGTCAGTGAT GATCGGGGTG AGGTGTTGTT CGAGCATTCG GTAGAGGTGG GTGATCTTTG GCGCATGTGT CAAACGAAGG ATGCACCGAT CCAGGATTGG GTCAGGTTGG CGGTGGAACG TGCCCGTCTG AGTCATGTTC CGGCAGTGTT CTGGTTGGAC AGCGCCCGTG CGCATGATGT GCAGGTGATT GCAAAAGTTG AGCGTTATTT AAAAGATCAC GATACCAACG GTTTGGATAT ACGTATTATG TCGCCGGTGG CAGCGATGGA ATTTTCGCTG GCCCGTATTC GTAAAGGTCA GGACACGATT TCGGTGACCG GGAATGTGTT GCGGGATTAT TTGACCGATT TATTCCCAAT CATGGAATTG GGCACCAGTG CCAAGATGCT TTCCATTGTT CCGTTAATGG CGGGAGGTGG TTTGTTTGAA ACCGGTGCCG GTGGTTCCGC GCCGAAGCAT GTACAGCAAT TTACTGAGGA GAATTACTTG CGTTGGGATT CGTTGGGTGA GTTTCTGGCG TTGGCTGCAT CGTTGGAGCA GCTTGGTAAC CGCTATGATC ATGTTGCTGC AAAGGTGTTA GCGAAAGCGC TGGACGTGGC TAACGGTCAA ATTTTGGATA ACAACAAATC TCCTGCGCGT GAAATCGGTG AGTTGGATAA TCGTGGTAGC CATTTTTATC TCGCTTTGTA TTGGGCTCAG GCATTAGCTG CACAGGATGA GGATGTTGCG TTGCAGGTTA AGTTTGCATC TTTGGCTAAA GTGCTGAGTG AGCATGAGGT AGCCATCGTT GCTGATCTCA ATGCGGTTCA GGGATCTCCA GTGGATATTG GTGGTTATTA TCATCCTGAT TTGGCTAGGG TTGCTGCTGC GATGCAGCCT AGTAAGACCT TCAACGATGC GTTGAGGTTG TTCTCGAGTT GA
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Protein sequence | MSSTPKLIYT LTDEAPFLAT QSLLPIIKAY TKVAGIQVET RDISLAGRIL AQFPDVLTET QRVSDDLAEL GEMTASPDAN IIKLPNISAS MPQLKAAIKE LQEQGYLLPD YPDEPKNSAQ KDVKMRYDRV KGSAVNPVLR EGNSDRRAPL SVKNYVRKYP HRMGAWSTTS KSHVAHMDGG DFFGSERSAV LAQAGMLKVE LIAKDGTVTV LKDKVAVSAG DIVDAAVLSK QALAVFVAAQ MNDAKSQGVL FSVHLKATMM KVSDPVIFGV FVSEFYKEAL AKHADTLKQV GFDPNNGIGD LYARIVALPE EMQAVIRADV QAQYAKRPGL AMVNSGKGIT NLHVPSDVIV DASMPAMIRS SGQMWNVAGT LQDTKAVIPD RCYAGVYKTV INDCKLHGAF DPMTMGSVPN VGLMAQKAEE YGSHDKTFQV QSVGVVRVSD DRGEVLFEHS VEVGDLWRMC QTKDAPIQDW VRLAVERARL SHVPAVFWLD SARAHDVQVI AKVERYLKDH DTNGLDIRIM SPVAAMEFSL ARIRKGQDTI SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGLFE TGAGGSAPKH VQQFTEENYL RWDSLGEFLA LAASLEQLGN RYDHVAAKVL AKALDVANGQ ILDNNKSPAR EIGELDNRGS HFYLALYWAQ ALAAQDEDVA LQVKFASLAK VLSEHEVAIV ADLNAVQGSP VDIGGYYHPD LARVAAAMQP SKTFNDALRL FSS
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