| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2234 |
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| Symbol | mdoD |
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| ID | 6120850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2357786 |
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| End bp | 2359399 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641650175 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001776715 |
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| Protein GI | 170731282 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCATGT ATAGACGAGA TTTCTTAAAA AGCGTTACTG CTGCTTGGGT TGCGTTTGGT
TTACCTAACC CTCTTGGGGG AGCGTTCGCT ACCAACAGGG TGATTGCTTT GCGTCGCTTG
GGTCAATCTC AGCGTTTTGA CTATGAATTG TTAAAGGAGC GCGCTCGCGC CCTCGCTGCG
GCGCCTTATC ATTCACGTAA ACGTGTGTTG CCGACACCAC TAGAGAGGCT AAGTTGGGAT
CAGTACCAAT CAATTCGTTA TCGCCAGGAT CATGCATTGT GGGCTGATAG TGATGCTCAT
TTCCAAGTCA AGTTTTTCCA CCTTGGTCTG TATTTCCATA GCCCGGTGCG GATGTACGAA
GTGGTGGATG GTATGGCGCA GGAGTTAGCT TATGATCCCG CGGCTTTTGA CTATGGTAGC
AGTGGCTTAA ATGGGAAGGG GTTGCCCAAG GATCTGGGTT TCGCAGGATT CCGATTGAAT
ACTCGTAAGG ATACTGATCG AGATTTTGCT GCCTTCCTAG GGGCAAGCTA CTTTCGCGCT
GTGGGACAGG AGGGACAGTA CGGCCAGTCT GCGCGTGGGT TAGCGGTCAA TACAGGGAGT
AGCGGACCAG AAGAGTTCCC GGACTTTATC GCTTATTACC TTGAGCAGCC GACTTCGGAT
GCGGATACCG TCGTGATGTA TGGACTTTTG GATTCGCCGA GTATTGCTGG CGCTTATCGT
TTTTCCATCA CTCACGCAGA TGTCCTACGG ATGGACATCG ACAGCGCATT GTATCCGCGT
GAAACCATTG AGCGACTCGG GATTGCTCCA TGTACCAGTA TGTACCAAGT GGGTGAGAAT
GATCGGCGCA TGGGTTGGGA TTGGCGTCCA GAGATTCATG ACACGGATGG ATTGTTTCTT
TGGACAGGGA ATGGTGAATG GATTTGGCGG CCCCTATGTA ATCCGCTACA TCTACGCTTC
AACATGTTTC TTGACAACAA TCCACGCGGT TTTGGTCTTT TGCAGCGTGA TCGTGATTTC
GATCACTATC AAGACGATGG TGTGTTTTAC GAGAAGCGTC CTTGCCTATG GGTTGAGCCT
AAACATGGCT GGGGTGAGGG GTCTGTCCAG TTGGTGGAGA TCCCAACATT CGATGAAACC
TTCGATAACA TAGTTGCCTT CTGGAATCCA CGGAATAAAC CTCACCCTGG TCAGGAACTA
CTGTTCGGGT ATCGGTTGTA TTGGGGTGCT CTTCCGCCTG TATCTTCTTC GTTGGCGTAT
TGTGTGGCTA CGCGTACAGG CTTAGGTGGT GTGGTTGGTC AGAAGCGTAA ATACTTCTCG
TGGCGGTTTG CTGTGGATTT TGTTGGTGGT AAATTGGCTG CCCTCGCCAG GGTTCATGAT
GTGAGTGTGG AACCAGTACT GCATATGACA CGTGGTCGCC CTGAGATCGT CTCGGCACGA
CCATTGCATG AGATCCGTGG CTATCGCGTC ATGTTCGACG TAGTGCCCTT GGAGGACAGT
GCTCAACAGA TTGACATCCG TTTGTACTTG CGTGATACCA ATGGGGAGCC ATTAACAGAA
ACGTGGCTCT ATCAATGGAT GCCACCGATA TTGGAGGAGC GCAAGATTTA TTAA
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| Protein sequence | MLMYRRDFLK SVTAAWVAFG LPNPLGGAFA TNRVIALRRL GQSQRFDYEL LKERARALAA
APYHSRKRVL PTPLERLSWD QYQSIRYRQD HALWADSDAH FQVKFFHLGL YFHSPVRMYE
VVDGMAQELA YDPAAFDYGS SGLNGKGLPK DLGFAGFRLN TRKDTDRDFA AFLGASYFRA
VGQEGQYGQS ARGLAVNTGS SGPEEFPDFI AYYLEQPTSD ADTVVMYGLL DSPSIAGAYR
FSITHADVLR MDIDSALYPR ETIERLGIAP CTSMYQVGEN DRRMGWDWRP EIHDTDGLFL
WTGNGEWIWR PLCNPLHLRF NMFLDNNPRG FGLLQRDRDF DHYQDDGVFY EKRPCLWVEP
KHGWGEGSVQ LVEIPTFDET FDNIVAFWNP RNKPHPGQEL LFGYRLYWGA LPPVSSSLAY
CVATRTGLGG VVGQKRKYFS WRFAVDFVGG KLAALARVHD VSVEPVLHMT RGRPEIVSAR
PLHEIRGYRV MFDVVPLEDS AQQIDIRLYL RDTNGEPLTE TWLYQWMPPI LEERKIY
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