Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2214 |
Symbol | rlmL |
ID | 6120830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2334498 |
End bp | 2336672 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641650157 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001776697 |
Protein GI | 170731264 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.301767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGATTTT TTGTTTCCTG CGCTAAAGGT TTGGAATATC TGTTGGTTGA TGAAGTGTTG GCGCTTGGTG CCGCTGGGGC TACGGCGACA GTGGCCGGTG TCAATGTGGA AGGTGGGTTG TGCGATGCGC AGCGTCTGGT GCTGTGGTCG CGTTTGGCCA GCCGTGTGTT GTGGCCGTTG GCGGCGTTCG CATGTGCGGA TGAGGATGCG TTGTATGCCG GTGTTGCGGC GTTGCCGTGG GTGGAGCATG TTTTGCCGGG CCAGACGTTG GCGGTGGATG CGCACGTTTC CGGGGAGGCG ATCACTCATG CGCGTTACGC TGCACAGCGT GTGAAGGATG CGGTGGTCGA TACGTTGCGT GATGCTGGTG TGGTGCGGCC ATCGGTTGAT GTGGAGCACC CAGATGTACG TTTGAATTTG TCGCTCCGCA AGGGGCGTGC GACGTTGTCG GTGGATCTGG GTGGTCGGGC GCTGCATCAC CGTGGTTGGC GTCAGGCACC GCATGCGGCG TCATTGAAGG AGCATTTGGC GGCTGCGGTG TTGTTGCGTG CCGGCTGGGC CAAGGTCTAT GCCGAAGGTG GGGGGCTGCT CGATCCGATG TGCGGCAGTG GCACGCTCTT GATTGAGGGG GCGTTGATGG TGGCCGATGT GGCGCCTGGG TTGTCGCGTT ATGCGGATCC TGATGCGATG TCTCATGTGT CGGTAGCAGA GCGTCCGGTG TTGTTGCCGA GTCGTTGGCG TGGTTTTGAT GTCGTGGCGT GGGAAGCCTT AGTGGTTGAT GCGCAGCAGC GTGCCAGGCG AGGGTTGGCG GAGTTGCGTC CGGTGTTGCA CGGCAGTGAC ATTGATCCTC GGGCACTTGG TGCTGCGTCT GCGAATGCGC GGGCGGCGGG TGTTCAAGAT GCAATTGAGT TTGTTGTTGC CGGTATTGAT GTGCTGCCGG CTGTGTCTGA GCCTCACGGT GTGGTGGTGT GTAACGCGCC CTATGATGTG CGTTTGGCGG CCGATCCGGG GTTGTATCGG CATTTGGGGG ATGCGTTACG GCGTGTGGTG CCGCGGTGGC GGGCCGCGCT AGTGTGTGGC AGTAATACGT TGGCATTTGC AACGGGATTG CGGGCTGGTA AGAGGTATCA GTTTTTCAAC GGTGCGTTGG AATGTGTGTT GATTGTCTGT GATCCGGTGG TGCCGTTAGC GCGTGAGGCA GGGGGAGCGC AGGCGTTGAG CGAGGGGGCG CAGATGGCTG CTAATCGTCT GCGCAAGAAT GTGCAGCGCT TAAAGAAGTG GCGTATCCGG GCGGGGGTGG AGTGTTACCG GGTTTACGAT GCTGATTTGC CGGAGTATGC GGCTGCGATT GATGTGTATC AGGAGGTGGA TGGTGCGCGG CGGTTATTCC TCCATGTGCA GGAGTATGCG GCGCCGACGT CGATTCCTGA GGGGGATGTG CGGCGGCGGC GTCATGAATT GCTTGCTGCG GTACGCGCGG TGTTTGATGT GTCGGTGGCT CAGGTGGCTT TAAAAACGCG GCAGCGCGGT AAGGGGGGGA GTCAGTATGG TTGTTTTGCG CAGCGTGGGG AGTTTTTTCA TGTGTGTGAG CATGGTGCGT TGTTGCGTGT GAATTTGTTT GATTATCTGG ATACGGGGTT GTTTCTTGAT CATCGTCCTT TGCGCGGGCG CATGGCGCGT GAGGCGGTGG GTAAGCGTTT TCTAAATGTG TTCTGTTACA CGGGTGTGGC GAGTGTGGAG GCGGCAGTGG CTGGTGCTGC GGCGACAACC AGTGTGGATT TGTCATCCAC GTATTTGCAT TGGTGTACGG ATAATTTTGC GTTGAATGGG CAAGGTGGGG TGAGGCATCG TTTGGTGCAG GCGGATGCGT TGGCTTGGTT GGAGGCGGAG CGTGGTCAAT ACGATGTCAT TTTTTGTGAT CCGCCGACGT TTTCGAATTC GGCGCGCGCT GATGATTTTG ATGTGCAACG CGATCATGTG CGTTTGCTGC GTGCGGCTGT TGCGCGGTTG ACGCCTGGTG GGGTGCTGTA CTTTTCCAAT AATTTCCGCC GTTTCCGTTT GGACGTGGAT GCGGTTGCTG CGTTTGCGCA GTGTGAGGAA ATCAGCTCGG TGACGATTGA TTTAGATTTT TCTCGCAATA CGAGGATCCA TCGTACGTGG CTGTTGTGGC GGTAG
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Protein sequence | MRFFVSCAKG LEYLLVDEVL ALGAAGATAT VAGVNVEGGL CDAQRLVLWS RLASRVLWPL AAFACADEDA LYAGVAALPW VEHVLPGQTL AVDAHVSGEA ITHARYAAQR VKDAVVDTLR DAGVVRPSVD VEHPDVRLNL SLRKGRATLS VDLGGRALHH RGWRQAPHAA SLKEHLAAAV LLRAGWAKVY AEGGGLLDPM CGSGTLLIEG ALMVADVAPG LSRYADPDAM SHVSVAERPV LLPSRWRGFD VVAWEALVVD AQQRARRGLA ELRPVLHGSD IDPRALGAAS ANARAAGVQD AIEFVVAGID VLPAVSEPHG VVVCNAPYDV RLAADPGLYR HLGDALRRVV PRWRAALVCG SNTLAFATGL RAGKRYQFFN GALECVLIVC DPVVPLAREA GGAQALSEGA QMAANRLRKN VQRLKKWRIR AGVECYRVYD ADLPEYAAAI DVYQEVDGAR RLFLHVQEYA APTSIPEGDV RRRRHELLAA VRAVFDVSVA QVALKTRQRG KGGSQYGCFA QRGEFFHVCE HGALLRVNLF DYLDTGLFLD HRPLRGRMAR EAVGKRFLNV FCYTGVASVE AAVAGAAATT SVDLSSTYLH WCTDNFALNG QGGVRHRLVQ ADALAWLEAE RGQYDVIFCD PPTFSNSARA DDFDVQRDHV RLLRAAVARL TPGGVLYFSN NFRRFRLDVD AVAAFAQCEE ISSVTIDLDF SRNTRIHRTW LLWR
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