Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2203 |
Symbol | |
ID | 6120815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2323036 |
End bp | 2324226 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641650142 |
Product | elongation factor Tu |
Protein accession | YP_001776686 |
Protein GI | 170731253 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000805833 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGG ATAAGTTCAA ACGCACTAAG TTGCACGTAA ATGTTGGTAC GATTGGTCAC GTTGACCATG GCAAGACTAC ACTGACTGCG GCGCTGACCA AGGTGGGTGC TGAGCGTTTT GGTGGCGAGT TTAAGGCATA CGATGCGATT GACGCGGCAC CTGAAGAGAA GGCGCGCGGG ATTACTATTT CTACGGCGCA CGTCGAGTAT GAAACTGAAG TCCGCCACTA TGCCCATGTG GACTGTCCTG GTCATGCTGA TTATGTGAAA AACATGATTA CAGGTGCGGC GCAGATGGAT GGTGCGATTT TAGTATGTTC TGCTGCTGAT GGTCCGATGC CTCAGACTCG TGAACACATT TTGTTGGCTC GCCAGGTGGG TGTGCCTTAC ATTGTTGTGT TCTTGAATAA GGCTGACATG GTGGATGATG CTGAGTTGCT TGAGCTTGTG GAGATGGAAG TTCGTGAGTT GTTGAGCAAG TATGATTTTC CTGGTGATGA TACTCCTATT GTGAGAGGTT CTGCGTTGAA GGCGCTGGAG GGTGATCAGT CTGAGATTGG TGTACCGGCG ATTATTCGAC TGGCGGAAGC ATTAGATACC CACATTCCGA ATCCGGAGCG TGCGATTGAT CGTCCGTTTT TGATGCCTGT GGAAGATGTG TTTTCGATTT CTGGTCGTGG CACTGTGGTG ACAGGTCGTA TTGAATGCGG TGTGATTAAG GTTGGCGATG AGGTGGAAAT CGTTGGCATT CGTCCGACGT CGAAGACGAT TGTTACGGGT GTTGAGATGT TCCGTAAGTT ATTGGATCAA GGTCAGGCTG GTGACAACGC GGGTCTATTG TTGCGCGGTA CGAAGCGTGA TGAAGTGGAG CGTGGTCAGG TGTTGGCGAA GCCTGGTTCG ATCAAGGCGC ATAAAGAATT TGAGGCTGAG GTGTATGTGC TTTCGAAAGA GGAGGGTGGT CGTCACACTC CGTTTTTCAA TGGATACACT CCGCAGTTTT ATATGCGTAC AACAGACATT ACAGGTAAGG TGTGTTTACC TGAGGGTGTA GAGATGGTGA TGCCTGGTGA TAATGTGAAG GTGACAGTAT CGCTGATTAA TCCTGTGGCG ATGGGTGAGG GTCAGCGCTT TGCGATCCGT GAAGGTGGGC GGACAGTGGG TGCTGGCGTT GTTTCGAAGG TTATTGGTTA A
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Protein sequence | MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI DAAPEEKARG ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDAELLELV EMEVRELLSK YDFPGDDTPI VRGSALKALE GDQSEIGVPA IIRLAEALDT HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK VGDEVEIVGI RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGS IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV EMVMPGDNVK VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG
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