Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2177 |
Symbol | |
ID | 6120148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2288954 |
End bp | 2289616 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641650115 |
Product | response regulator receiver protein |
Protein accession | YP_001776660 |
Protein GI | 170731227 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.430622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATTA AGATTTTTCT GATTGATGAT CATACTCTCG TGCGTGTTGG CATGAAGATG ATCTTATCCA ATGAATTAGA TCTCGAAGTG ATAGGGGAAG CGGAGACAGG GGAGGCGGCT TTACCACAGA TCCGTGAGCT ACGCCCGAAT GTCGTATTGT GTGACATGCA TCTCCCTGGG GTGAGTGGGC TGGAGATTAC AGAAAAATTG GTGAAAGGGA ATTATGGTAG CCGTGTAATT ATTGTTTCGG TGTTGGAAGA CGGCCCATTG CCGAAGCGAC TGTTAGAGGC TGGAGCTTCT GGTTATGTTG GTAAGGGCGG TGATGCTAAT GAGTTGCTGC GTGCTATCCG TGAAGTAGCT TTAGGTAAGC GCTATCTTGG TAACAGCATT GCGCAGAATT TGGTGTTGTC AAGCCTTGAA GGAGGATGTT CACCTTTTGA TGTTTTGTCG CCGCGTGAGT TGGAAATTGC CTTGTTGTTA ATCCAAGGTC TGAGTCAGGG GGCTATTGCT AAGCGGTTGT GTCTCAGTCC TAAGACAATC AACACTCATA AAGTGCGTTT GTTCGCTAAA GTTGATGTTC GAGATACCAT TGCTCTGGCT CGGTTGGCTA TTCAGTACGG GGTGAGTACT CCGGAGAAAT ATAGTTTAGA TAAAAGGATC TGA
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Protein sequence | MTIKIFLIDD HTLVRVGMKM ILSNELDLEV IGEAETGEAA LPQIRELRPN VVLCDMHLPG VSGLEITEKL VKGNYGSRVI IVSVLEDGPL PKRLLEAGAS GYVGKGGDAN ELLRAIREVA LGKRYLGNSI AQNLVLSSLE GGCSPFDVLS PRELEIALLL IQGLSQGAIA KRLCLSPKTI NTHKVRLFAK VDVRDTIALA RLAIQYGVST PEKYSLDKRI
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