| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2164 |
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| Symbol | |
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| ID | 6120135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2272158 |
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| End bp | 2273864 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641650102 |
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| Product | protease |
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| Protein accession | YP_001776647 |
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| Protein GI | 170731214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCA TGTCGAAGGT GGCGGTTGCA ACATTTAAAC TGGTGACCTC GCCAGAATTT
CGCGACAGGA GCTTCACTTT GCGCCGACTA TCACTTGCTA TTGCCACTGC TCTCGTATTG
CCTCTGGGTG GTATTGGTCT CAATGCTCAG GAAAGCCGCT TACCTGACAT TGGTTCCTCG
GCGGGGCAAT TACTGACTCC GGCACGTCAG GCCGAATATG GCAAGTTGAT GATGGCTGAG
TTACGTAACT ACGGCTATGT GTTGGAAGAC CCGTTACTAC AGGGGTGGTT GCAGAGCATA
GGAGAACATT TGGCGGCCAA CAGTGATCAA CCGCACCAAC TATTTACCTT TGTATTGTTA
AAAGAACGTC AAATTAATGC GTTTGCCACA TTGGGCGGTT ATGTAGCGGT GAATTCCGGC
CTGTTGCTGA CCGCTGAGCG TGAGGATGAG GTTGCAGCGG TGCTCTCCCA CGAGATCATG
CACATTAATC AGAAGCATGT GCTGCGTAGC GTTGAGCGTG CACAGCGTGA TCAGATTCCG
ATTCTGCTAG GGATGCTGGC GGCTGTGATC GCCGCGCAGC ACGTTGGCGG TAATTCAAGT
GGTGATGCGA CGATGGCTGG TATTACCAGT GCCATGGGAC TCATGCAGCA GCGCCAGATC
AATTACACCC GTTCCAACGA AGCTGAAGCT GATCGTCTTG GAATTCACAC CTTGGCGCGT
AGTGGGTATG ACTTAGAGGC GATGGCTGGC TTTTTTGAGA GAATGTCGCT GGTGACACGC
GGTAATTCTG GTGGTGACCA GGCACCGGAC TATTTACAGA CCCATCCTGT GACCGTGACC
CGCATCAGCG AGGCGAAGGC ACGTGCCGAG CAACTCAAGA AACAAAAGGG ACTCACGGGG
GGCGAGGTTG ACCTAATGTC CCGGGAGCGT TTGAATTTGC ATCATGTTTT TCCTGGTGTT
CCTGCTAATC CGTTGTTGCC AAAAGTTCTA CAGCCAGCGT ATAGCGAGTT ATCTCGTGGG
CCTAGTGGTC AGTTCGGTTG GGCCAAAGAG CGCTTACGCG TACTGAGTGC GAAATCCCCA
GAGAGTGCGC TGCGTGAGTA TGAAGCCCTG CGTCGCAACA CAAAGGGGGG ATTGAATGAT
TTTCAGCGCT ATGGGATGGC GTTGGCCAAG TTCCGTAATG GCAGCAATCT GGACGAGGTC
ATGCATGAAT TCCGTACATT GCTTGAGGTA CACCCTAACA ATGTCTGGCT TGCTTCGGCA
TTGGCGCAGA CCCAAGCGCG GGCTGGACAG CGTCACGAGG CTGGTGAACG TTTCGATGCC
TTGTTGCGGC GCTTGTCTGG GCAGCGTGCA GTGGTGCTCA TGTATGCGGA GATGCTTAAC
GAAGGCGGTA ACCTTCAGGA TGGTAAGCGT GCTCAGGCGT TGTTATTGCC GTTACTGCGT
CAGTTGTCTG AGGATGCGTT ATTTCAACAA ACCTTCGCGC GCTCCTGCGA GTTGGCCGGT
GCCACTGCAC GCGCCAGTGA GGCCTATGCG GAAGCCGCGT TTCTGAACGG ACGTCCGGAG
CAGGCATTGA TTCAGTTGCA GGCGTTGAAG AAGGAGAATC TGGATTATGT GACACGTGCG
CGAGTGGATG CGCGTATTGC GGCGATTACT CCAGCGGTGC TGGAAATGCG TCGTCAGGGT
ATCCGCGATC CGGATTTGGA TCGATGA
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| Protein sequence | MPRMSKVAVA TFKLVTSPEF RDRSFTLRRL SLAIATALVL PLGGIGLNAQ ESRLPDIGSS
AGQLLTPARQ AEYGKLMMAE LRNYGYVLED PLLQGWLQSI GEHLAANSDQ PHQLFTFVLL
KERQINAFAT LGGYVAVNSG LLLTAEREDE VAAVLSHEIM HINQKHVLRS VERAQRDQIP
ILLGMLAAVI AAQHVGGNSS GDATMAGITS AMGLMQQRQI NYTRSNEAEA DRLGIHTLAR
SGYDLEAMAG FFERMSLVTR GNSGGDQAPD YLQTHPVTVT RISEAKARAE QLKKQKGLTG
GEVDLMSRER LNLHHVFPGV PANPLLPKVL QPAYSELSRG PSGQFGWAKE RLRVLSAKSP
ESALREYEAL RRNTKGGLND FQRYGMALAK FRNGSNLDEV MHEFRTLLEV HPNNVWLASA
LAQTQARAGQ RHEAGERFDA LLRRLSGQRA VVLMYAEMLN EGGNLQDGKR AQALLLPLLR
QLSEDALFQQ TFARSCELAG ATARASEAYA EAAFLNGRPE QALIQLQALK KENLDYVTRA
RVDARIAAIT PAVLEMRRQG IRDPDLDR
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