Gene Xfasm12_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2156 
Symbol 
ID6120127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2262743 
End bp2264101 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content54% 
IMG OID641650096 
Productouter membrane export factor 
Protein accessionYP_001776641 
Protein GI170731208 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCC GCTGCCTCGC CCTGGCCGTG ACCACCGCCC TATTTCCCGT CGTTTCACAA 
GCGACAAACC TATTACAAGT CTACGAAATG GCACGCGCTG CTGACCCTCA ATTAAGCGCA
GCCGAATCCA CTCGGCTATA CAGCGTTGAA GGGCAAGTTC AGGCACGTGC AGCGCTGCTG
CCGCAGATGA GCGGCGCAGC CACCCTGGCA CGTAGCCGCA CTGAATACGA CGGTATCAGC
GGATCAGCCA TCAGTAAGAA CCGCCAATAC AGCATCAACG GTAGCCAAAC TCTGTTCAAC
TGGAACCAGT TTTCCAACCT TCGATCACAA CGCGCGATCG CCAAAGCCGC CGATTTCACA
CTGGAATCGG CCAAACAAAA CTTGATTGTG CGCAGCTCAG CTGCATACTT CAGCGTCTTG
ATCGGGATTG AATCACTGAT CGCCGCCGAA GCGAATGAAG CATCAGCTAA GCGCCAGTTT
GATTACGCAC AGAAACGTCT TGAGGTTGGC CTATCACCCA TCACAGACCT TCATGAAGCA
CGTGCCAGCT ACGACCAAGC CCGTGCAGAC ACCATCACTG CACGCAACAC ACTGCAAGAC
TACTACCAAG CATTGGCAGA GATCACTGGA CAACCCGTCA CTGACCTGCG TGGCCTCCCT
GAAGACTTCC GACCAGAAGT GCCAGCGAAA TTCAGTAACA TTGACCAGCT GGTCACTGAA
GCCATCTCCA ACAATCCGTC GCTAAAAGCG CAGCAATTGC AAGTCAATGC CGCGGAATCC
AGCATCTCAG CGGCACGTGG CGAGCACTAC CCAACACTGT CACTGAGTGG AAGCCTGGGG
AAAAGTAAAG CCTGGGGATC CTCCAGCGGC GCAATGAGCG CACTCATTCC TGACAGGGAC
CAACCGATTA GCGACACCAA CAACTTACAA TTAACGCTGT CAATACCACT CTTTGCAGGT
GGTGCAACCC AATCCAGGGT CCGTCAGGCA ATCGCACAAC GCGACATCCA ACAGGATAAC
TACGAGCAGA ATAAGCGCAC GCTAAACCGT AATACCCGCA ATGCCTACCA AAATATGATT
GCAGGCATCA GCGAGGTCGA AGCGCGTCGC TTGGCAGTCG TCTCAGCACA AGCGGCCCTA
GATGCTTCTC AAGTCGGCCT GGAAGTCGGC ACCCGAACCC TGCTGGACGT GGTACAGAAC
CAACGTATCC TTTTCTCGGT ACGGCAAGCC TATGTACAAG CACGCTACAA CTTCCTACAA
AACCGTCTAC TACTTTCCCA GAACAGCGGC ACCCTGAGCA TTGAGGATGT ACAAGAGATC
AATCAATTGC TGACGGCTGA TTCCGAGAGA AAACTGTAA
 
Protein sequence
MIRRCLALAV TTALFPVVSQ ATNLLQVYEM ARAADPQLSA AESTRLYSVE GQVQARAALL 
PQMSGAATLA RSRTEYDGIS GSAISKNRQY SINGSQTLFN WNQFSNLRSQ RAIAKAADFT
LESAKQNLIV RSSAAYFSVL IGIESLIAAE ANEASAKRQF DYAQKRLEVG LSPITDLHEA
RASYDQARAD TITARNTLQD YYQALAEITG QPVTDLRGLP EDFRPEVPAK FSNIDQLVTE
AISNNPSLKA QQLQVNAAES SISAARGEHY PTLSLSGSLG KSKAWGSSSG AMSALIPDRD
QPISDTNNLQ LTLSIPLFAG GATQSRVRQA IAQRDIQQDN YEQNKRTLNR NTRNAYQNMI
AGISEVEARR LAVVSAQAAL DASQVGLEVG TRTLLDVVQN QRILFSVRQA YVQARYNFLQ
NRLLLSQNSG TLSIEDVQEI NQLLTADSER KL