Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2051 |
Symbol | |
ID | 6120254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2151182 |
End bp | 2152588 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641649999 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001776547 |
Protein GI | 170731114 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATCTA TGCCACTTTC GTTAATTGCG TACTGGACCG GCGGTTATCT GCACGGTGAG GATGTCAGGG TGTGTGCAAT TGGTCATGAC ACCCGTGCGC TGGATGTTGG CGTGTTGTAT GTGGCGTTGC GAGGCCAGCG TTTCGATGCG CATCTATTCT GCGCCGAAGC GGTGGCACGT GGTGCGGCGG GGGTATTGGT TGATCACGTG TTGCCAGAGT TGGATGTTCC TCAGGTCGTT GTGGCCGATA CTGAGCGTGC GCTTGCGGCG ATCGCTTCAG CCTTGCAGCG TGACCGGACA TCTTTTGTGT TGGCATTGAC TGGGTCCAAT GGAAAAACCA GTGTTAAGGC AATGCTTGTA TCCATTTTGG AGCATGCTGC GGCACAGAGT AGTACGGTGG TCTATGCGAG TTCTGGTAAC CGCAACAATG AGATTGGCCT GCCGTTGGCA GTGATTGCCG CGCCCGATAA TGCCGATTTT GCGGTGTATG AGATGGGTGC TGGCAAGTTG GGCGACATCG GTTATTTGAC TGACATCGTT ACGCCGGATG TGGCGTTGGT TAATAACATC GCACCGGCGC ACTTGGAGCG CATGGGGAGC TTGCTTGGTG TGGCGCGTAC CAAAGGTGAG ATCTATGCCG CGTTGCGGCC TGGTGGTACT GCTGTGATCA ATATGGATGA TGCGTTTGCT TTGTGGTTTG AGCAGCAGTG TGTTCCGGCT GGTTGTGCTG TGTTGCGGTT CGGTTTGCAG GCAACTGCTG ACGTTACTGC GTATAGCCTG CAATTCAGTG AGGACAGTGT GCGTTTTGTA CTTGTGACGC CACAGGGGGA GGTGCCGGTG TGCTTGGCGC TGTCTGGGCG TCACAATGTG TGTAATGCGC TGGCAGCGGC AGCAATGGCG TTGGTTGCTG GTATTCCTTT GTCGCAGATT GCGGCTGGTC TTGGTTTGGC TCGGTCGGTG GCCGGTCGCC AAGTTGCGCA TGCTTTACCC GGTGGTGCGG TATTGATTGA TGATAGTTAT AACGCCAATC CTGGGTCGCT GGATGTGGCA ATCGATACGT TGACGACTGC TTCCGGCCCA GGATGGTTGG TGCTTGGCGA TATGCGCGAG CTTGGTTTGG AGGGTGTGGC GCTGCATGCC GCTGCTGGAC GTCGTGCACG TCAAGCCAAA GTAGCCCGTT TATATGCACT GGGTGAGTTG AGTGCAGTTG CAGCGCGGGA GTTTGGTGAG GGTGGATATG TGTTTGCCGA TCATGATGCG TTGGCTGCGG TGTTGTGGGA TGACTTGATG CATGTACCAG GTGGGGTGCC GCCGCGGGTG CTTGTGAAGG GGTCGCGGGG TAGTGCGATG GACAAAATTG TGGGCGCTCT GTTGTCGAGT GCGGAGGGCG TAGCGCATGT TGTTTGA
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Protein sequence | MRSMPLSLIA YWTGGYLHGE DVRVCAIGHD TRALDVGVLY VALRGQRFDA HLFCAEAVAR GAAGVLVDHV LPELDVPQVV VADTERALAA IASALQRDRT SFVLALTGSN GKTSVKAMLV SILEHAAAQS STVVYASSGN RNNEIGLPLA VIAAPDNADF AVYEMGAGKL GDIGYLTDIV TPDVALVNNI APAHLERMGS LLGVARTKGE IYAALRPGGT AVINMDDAFA LWFEQQCVPA GCAVLRFGLQ ATADVTAYSL QFSEDSVRFV LVTPQGEVPV CLALSGRHNV CNALAAAAMA LVAGIPLSQI AAGLGLARSV AGRQVAHALP GGAVLIDDSY NANPGSLDVA IDTLTTASGP GWLVLGDMRE LGLEGVALHA AAGRRARQAK VARLYALGEL SAVAAREFGE GGYVFADHDA LAAVLWDDLM HVPGGVPPRV LVKGSRGSAM DKIVGALLSS AEGVAHVV
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