| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2004 |
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| Symbol | |
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| ID | 6121088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2089280 |
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| End bp | 2091955 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641649956 |
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| Product | beta-mannosidase precursor |
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| Protein accession | YP_001776504 |
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| Protein GI | 170731071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000805644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC ACCGACACAT CTGCCTCCGC CTGGCCGCCT TCCCCCTGCT CGCCTTTGGC
ACCCTCCTCA CTGCCTCGGC CGCCCCACCC AGCAGCCACC CCCTCAGCAA CTGGCACCTC
CGCCTCGCCC CTGACCAACC CACAACACAC ACCCTCCCCT TAAAAACAAC CACCTGGCTA
CCCGCACACG TCCCCGGCAC CGTACAAACC GACCTCATCG CCGCTGGCAT CGTCCCCGAC
CCCTTCTACC GTGACCAAGA AGCACAGATT CAATGGATCG GCCTCAACGA CTGGCAATAC
CGAACCCATT TCCACATCGA CACCGCCACA CTGACCCGCC AACATATCGA ACTCGTCTTC
AACGGCATCG ACACCCTCGC CACCGTCACC CTCAACGGCA CCCCCCTCCT CCATCCCAAC
AACATGTTCC GGCGCTGGCG CGTGGACGCA AAACCACTGC TCAAACGCGG TAAAAATATC
CTGGAAATAA CCCTCTACTC ACCCATCAAA AAGATTCAAC CCTGGCTCAC ACAACAACCC
TATGCCCTCC CCGGCGCCTA CGACTCCGCC TTCCACGACG AACCAACCGC ACGCCACAGC
GCCACCTACG TACGCAAAGC ACCCTACCAA TTCGGCTGGG ACTGGGGACC GCGCATCGTC
ACCACCGGCC TCTGGAAAAA CGTCACCCTG GACACCTGGG ACACCACCCG CATCAATGAC
CTGCACATCG CCCAACAACG CGTCGACGCC GACACCGCAC ACCTAGAAGC ACAACTCACC
CTAGATGCAA CGCATCGCGG CCCCGCCCAC ATCACCCTGC AAATCTTTGA CCCAGACGGC
CGCCCAATCG CCCAATACCG CCAACACCCC ACCCTCGACA CCGGCACCAA CCACATCCAC
CTCCCCGTGC GGATTGCCCA ACCGCGGCGC TGGTTCCCCG TCGGCTACGG CACCCCAGAC
CGCTACACCT TTAAAGCCAC CGTCCGCGAT GCCGCCGGCA CCATCCAACA CATCGAACGC
ATCACCGGCT TACGCACCAT CACCCTGCGT CGCGAACCGG ACCAATGGGG AAAAAGCATG
ACCCTCGTGG TCAACGGCAT TCCGATCTTC GCCAAAGGCG CCAACCTCAT CCCATTCGAC
AGCATCCCCA GCCGCGTGAC CGAAGCGACC ATCCGCCGCA CCCTCCAAGA CGCCCACACA
GCCAATATGA ACATGCTCCG CGTCTGGGGC GGCGGCCACT ATCAAGACGA ACACTTCTAC
GCCCTGGCCG ACGCACTGGG CATCATGATT TGGCAAGATT TCATGTTCGG CGGAGCCATC
CCCCCCGACG ACGTGGACTT CCGCGAAAAC GTCCGCCAAG AAGCCATCGA ACAACTCACC
CGACTCCGCG ACCACCCCAG CATTGTCCTG TGGTGCGGCA ACAACGAAGT ACAGACCGGC
TGGGAACATT GGGGCGACCG CATCACCTTC AAACAATCCC TGCCCCCTGA AGAACGCAGC
AAAATAGAGC GCGGCATAAC CACCCTGTTC GGCAGCGTCC TGCGCGAAGC CGTCCACCTC
TACTCCCCTA GCACCCCATA CTGGGCCACC TCCCCCGGCA CCGACCTCGA CGGCCCAGCA
GACCAAACCA ACGACGGCGA CATGCACTAC TGGAAAGTCT GGGGCAACCC CGCACTCCCA
GTCACCGAAT ACCTCAATAT CACCCCGCGC TTCATGTCCG AATATGGCCT GCAATCCTTT
CCGGATATAC GCACCATCCG CACATTCACC CGCCCAGAAG ACCTCTCCCT CACATCCCAA
GTGATGCGTG CCCACCAAAA ATTTGACAAC GGCAACGGCA ACCAACGCCT TCTGCTGTAC
ATCCGTCGTA CATTCGGCGA ACCCAAAGAT TTCGAAAGCT TCATCTACCT GAGCCAACTG
ATGCAGGCCG AAGGCATTGC CATTGCCGCC CAACACCTGC GTGCCGCACG GCCACAGACC
ATGGGATCCC TCTACTGGCA ACTTAACGAT GTCTGGCCCG GCGCCTCCTG GTCCAGCATT
GATTACGCAG GACGTTGGAA AGTCCTGCAC TACTACGCAC GCCGCTTCTA CGCCCCCCTC
ATGATCACCG CACTCCGTAA AGACGGCATG ACCGCCGTCT CCCTCGTTTC CGACCACACC
ACACCCCTGC ACGTCCATTG GCGCCTGCGC GTCCTAGACA TGGACGGCAC ACCACACCAC
ACCGACGACC AACACACCAC ACTGCCCCCC TTGAGCAGCC TCCAAGTCGC ACACTACAGC
GACGCACAAC TCCTCGGCCA CGCCGACCCC ACACACACCG TTGCCGTGTT TGAACTCCTG
GATGGCAACA CCCTCCTATC ACGTCAAACC CTTCTTTTCG ACGCCGCCAA ACACCTAAAA
CTCCCCCAGA CCCACATCCA CAACGCTTGG AAGACAGACC ACGGCATGTC TCTACTCACC
CTGACCAGCC CGACCCTGGC ACGCAACGTC TGGCTATCAT TTGGAGATAT TGATGCACAA
CTTTCCGATA ACGCCTTCGA CCTCCTCCCC GGAGAACCCC TGACCATCCA TATCCGCAGC
ACCGCCCCAC TGACACAACT CCAACACGCC CTGCACATCC GTGACCTGGC CGCAACCCTG
GCCGGTGCCC CACCCGAACC CGAAACAGCC CAGTGA
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| Protein sequence | MPRHRHICLR LAAFPLLAFG TLLTASAAPP SSHPLSNWHL RLAPDQPTTH TLPLKTTTWL
PAHVPGTVQT DLIAAGIVPD PFYRDQEAQI QWIGLNDWQY RTHFHIDTAT LTRQHIELVF
NGIDTLATVT LNGTPLLHPN NMFRRWRVDA KPLLKRGKNI LEITLYSPIK KIQPWLTQQP
YALPGAYDSA FHDEPTARHS ATYVRKAPYQ FGWDWGPRIV TTGLWKNVTL DTWDTTRIND
LHIAQQRVDA DTAHLEAQLT LDATHRGPAH ITLQIFDPDG RPIAQYRQHP TLDTGTNHIH
LPVRIAQPRR WFPVGYGTPD RYTFKATVRD AAGTIQHIER ITGLRTITLR REPDQWGKSM
TLVVNGIPIF AKGANLIPFD SIPSRVTEAT IRRTLQDAHT ANMNMLRVWG GGHYQDEHFY
ALADALGIMI WQDFMFGGAI PPDDVDFREN VRQEAIEQLT RLRDHPSIVL WCGNNEVQTG
WEHWGDRITF KQSLPPEERS KIERGITTLF GSVLREAVHL YSPSTPYWAT SPGTDLDGPA
DQTNDGDMHY WKVWGNPALP VTEYLNITPR FMSEYGLQSF PDIRTIRTFT RPEDLSLTSQ
VMRAHQKFDN GNGNQRLLLY IRRTFGEPKD FESFIYLSQL MQAEGIAIAA QHLRAARPQT
MGSLYWQLND VWPGASWSSI DYAGRWKVLH YYARRFYAPL MITALRKDGM TAVSLVSDHT
TPLHVHWRLR VLDMDGTPHH TDDQHTTLPP LSSLQVAHYS DAQLLGHADP THTVAVFELL
DGNTLLSRQT LLFDAAKHLK LPQTHIHNAW KTDHGMSLLT LTSPTLARNV WLSFGDIDAQ
LSDNAFDLLP GEPLTIHIRS TAPLTQLQHA LHIRDLAATL AGAPPEPETA Q
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