| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2003 |
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| Symbol | |
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| ID | 6121087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2086827 |
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| End bp | 2089265 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641649955 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_001776503 |
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| Protein GI | 170731070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00352357 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCCA CCCCAGCCCG CCCAACGCAG GAACCCCCAT TACTGCGGGC ATTGCTCACC
CTGTGCATTG CCGCACTGTC AACAACGAGC TTCGACACCA CCGCATCACA TCATAAAAAA
TCACAACACC CATTACCCCC GAGAACTGCT TCCGGCCCAC CACTACCACC ACTGCCACTG
ATCCCTGCAC CCGTTCAAAT ACAACGCGGT CACGGCCAAA TCCACATTGG CCCCCACACC
CTGATTTCCA TCCCCCCCAA CGATACCGAC GCACAACACA GCGCCACCTA CCTAGCCACA
CTGCTACAGC ACACCCGCAA CCTGACATTA CACATCCACA CCGAAACCAC CCCCACCCCA
GACAGCATCC GCCTACAACG CGACCCACAA TCACCCGTCA CTCAGACAGA AGGCTACACC
CTGCAAGCCC TCCCCAACCA AGGCATGCAT ATCACGGCAC GAGACGGAGC AGGACTGTTC
TACGGCGCGA TCACTGCATG GCAACTACTG ACTGCCGACA GCAACCAAGG CCCAACCGAA
ATCCCTACCG TCACCATTCA CGACTGGCCA CGCTTCAAAT GGCGCGGCCA ACTCCTTGAC
GTCGCCCGTC ACTTCCACGA CGTAGACACC GTCAAACACG TGATTGACGC CATGGCACAA
CACAAACTCA ACGTCCTGCA CCTACACCTC ACCGACGACC AAGGCTGGCG TATCGAAATC
AAACGCTACC CCAAACTCAC TGCAATCGGC GCCGAACGCA TCCCACCGGG CGCCGGACGC
CACGGCACCC CAGAACGCTA CGGCGGCTTC TACACCCAAG ATCAAATCCG CGAACTCGTT
GCCTACGCCA CCGAACGACA GATCACCATC CTCCCCGAAA TCGACATGCC CGGCCATGCA
CAAGCCGCCG TGGCAGCCTA CCCCGACATC ATCGGAGTCA CCAGCACCAC CCCACCCGTC
AGCGTCGACT GGGGCGTCAA CCCCTACCTC TTCGGCACCA GCACACCCAG CCTGGACTTC
ATCCGCAATG TACTCGACGA AGTACTCACC CTATTCCCCT CCCAGTACAT CCACATCGGC
GGCGACGAAG CCGTTAAAGA TCAATGGGAA GCCTCACACA CCATCCGCGC CCAAATGCGC
AAACTGGGCG TGAAAGACAC ACATGCCATG CAAGGCTGGC TCAACACACA ACTAGCCCAA
TACCTCACAA CACATGACCG ACGCCTGATC GGCTGGGATG AAATCATCCA AAGTGGCCTA
CCAGAGAGCG CCTCCGTGAT GTCATGGCGC GGCGTCGAAG GCGCCATTAC CGCCGCACAA
CAAGGACACG ACGTCGTCCT CGCCCCCGCT GGCTGGATGT ACCTAGACAA CCTGCAAACC
GAACGCAGCG ACGAACCAAA CGGCCGCCTC GCCACCCTGC CCCTCTCCCG CGTCTACACA
CTGGACCCCG TCCCCAAAGA ACTGACCCCC GACCAAGCCA TCCACATCCT GGGCCTACAA
AGCGCCCTGT GGAGCGAATA CATCCCCTCA CGCTGGCACA TCGACCACGC CCTATTCCCA
CGCCTCGCCG CCGTCGCCGA AGTCGCCTGG TCCCCCATGA CCGCACGCAA CTGGGACAAC
TTCCTCAAAC GCCTCCCCCC ACAACTACAC CGCTACCGCA CCCTGCACAT CGACTACAGC
GACGGCGCAT TCGCCCCCGA CATCATGCTG CAACACCGCT CAGCCTACGT CCTTGCTGGC
GAACCCCCTC ACATCACACT CAGCAACCAA ACCAACACCG GCCAAATTCA CTACACCACA
AACGGCAACG AACCGACCCT ACATTCCCCC CGCTACACCG CCCCATTTCC CATCACCCTC
CCCACCACAG TCAAAGCAGC CGTATTCACC GAAGACGGCC GCCCCCTGGC CGCCACCCGC
AGCCGCACCT TCGACCACAA CACACTGCTG AGTGTGGACA CCCAAGAATT ACGCAACTGC
TCCGACAAAG GACCACTGGG ATTACGCCTC CCCCTGCTAC CAGACATGCC CGACCCCAAC
ACCCCCGTGT ACAACGTCGA CCTATTCCAC GCCTGCTGGA TCGTCCCCCA AATACGCCTC
AACAACATAC AAGCCATCCA CATCGACGCC GCACGCCTAG CACGCAACTA CGGCCTGGCC
CACGACCAAT CCAAAGTCAT TCAATATCCC AAACACACCG CACACGGCGA ACTGGAAATC
CGCACCGACT GCAACAAAAA ACCACTGGCC GTGATCCCCC TCCCGCCCGG AGACACCATC
GGCGAACCAT TCACCCTCGA CGCCCCATTA CCACCGAACA TCGGCGTCCA CGACCTGTGC
CTACGCATCA CCGCCCCCAT CCACGGCCCA CTGTATGCCA TTGGTCGCGT CCAACTGATC
CACGACACCC CCGCATCACC TCCGCCCCCC ACACACTGA
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| Protein sequence | MPPTPARPTQ EPPLLRALLT LCIAALSTTS FDTTASHHKK SQHPLPPRTA SGPPLPPLPL
IPAPVQIQRG HGQIHIGPHT LISIPPNDTD AQHSATYLAT LLQHTRNLTL HIHTETTPTP
DSIRLQRDPQ SPVTQTEGYT LQALPNQGMH ITARDGAGLF YGAITAWQLL TADSNQGPTE
IPTVTIHDWP RFKWRGQLLD VARHFHDVDT VKHVIDAMAQ HKLNVLHLHL TDDQGWRIEI
KRYPKLTAIG AERIPPGAGR HGTPERYGGF YTQDQIRELV AYATERQITI LPEIDMPGHA
QAAVAAYPDI IGVTSTTPPV SVDWGVNPYL FGTSTPSLDF IRNVLDEVLT LFPSQYIHIG
GDEAVKDQWE ASHTIRAQMR KLGVKDTHAM QGWLNTQLAQ YLTTHDRRLI GWDEIIQSGL
PESASVMSWR GVEGAITAAQ QGHDVVLAPA GWMYLDNLQT ERSDEPNGRL ATLPLSRVYT
LDPVPKELTP DQAIHILGLQ SALWSEYIPS RWHIDHALFP RLAAVAEVAW SPMTARNWDN
FLKRLPPQLH RYRTLHIDYS DGAFAPDIML QHRSAYVLAG EPPHITLSNQ TNTGQIHYTT
NGNEPTLHSP RYTAPFPITL PTTVKAAVFT EDGRPLAATR SRTFDHNTLL SVDTQELRNC
SDKGPLGLRL PLLPDMPDPN TPVYNVDLFH ACWIVPQIRL NNIQAIHIDA ARLARNYGLA
HDQSKVIQYP KHTAHGELEI RTDCNKKPLA VIPLPPGDTI GEPFTLDAPL PPNIGVHDLC
LRITAPIHGP LYAIGRVQLI HDTPASPPPP TH
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