| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1997 |
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| Symbol | |
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| ID | 6121081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2080239 |
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| End bp | 2081915 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649949 |
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| Product | histidine kinase/response regulator hybrid protein |
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| Protein accession | YP_001776497 |
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| Protein GI | 170731064 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.947527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAGTA CGTTGTCCGG TGCCGATCAG TTTCGGGGTC CATGGTGGCT ACTACAAGTT
TTATCTAGTA CGGATTTTCT TTTGGACATA TCGCCTCCGC TTGTCCTGCA GTCATTCGAC
ATCCCATCGG ATGTCTACCG GGAGATGCTG TGTACCCTTG AGGCTGGCTT TTGCATCGTG
CAGATAGTGT TGGATGACGG TCAACCGGTT GACGGTATAT TCCGTTTGAC CAATGCCAGC
TTTGGTCGCC ATCTCCGGCT TGATTCGGTG GTTGGGGAGT CCGTGTGCGG CATCATGCCT
GACGATGGGC CGGAATACAT TAAGCGTTAT GGTGGGGTTG CGTTGTCTGG GCAGCGGGTT
CACTTCGAGG CGCGGGCGTT GCGCCGTTGG TATTCGGTGG AAGTGATGCG TGTTGGAGCG
CCGGAGGGGC GATTGCTTGG GGTTCTATTT GTGGATATCA CCGAGCACAA GCGTATGGAA
CGTAGGTTGG CCGAGAGCGA GGTGCGTTTC AATATTTTGG CTGATGGTTT GCCGATGCCC
GTTTGGGTAT TTGATGCACA AGGAGGGATG CGGTTCGTCA ATACTGCGTA TGGGGAGTTC
TTCGGTGTCG ATTTGAGCAG TGGCACGGTT CCAGAGTGGA GTATGGTGCT GCATCCGGAG
GATGTGCTGA TATTCGAGTT CAAGTTGAGT GCGGCGCTGA AGACGCAGAG TGCGCTTCGT
GCGTTGGTAC GGGCACGTCG TTATGACGGG CAATGGCGTT GGATTGAAAT GAGTGCCACG
CCGCGTTATT CGCCGGATGG TCACTTCATC GGTCTGACGG GGAACAGTCC GGATGTGACG
GAGCGTCTTG AGATTGAGTT GGTGCGTGAG CAGTTGCTGA AATCCGAGCG TGCGGCGCGC
AATGAGGCCG AGAATATGGC GCGATTGAAG GATGAGTTTC TGTCCACGCT TTCGCATGAG
TTACGTACCC CGTTAACGAC GATTTTGGGT TGGAGTGAGT TGTTGTTGCA ACGCATTGAA
GAGCAGCATC CTTGTTACAA AGGGTTGTCG GTGATTGCTA GCAGCGCCAA GGTTCAAAAG
CGTTTGATTT CGGATATGTT GGATCTAAGT AGCATGCTCC TGGGCAAGAT GCAGTTGGAA
ATGGAGGTGC TGGATTTAGT GGAGCAGATC CGCGAGGTGA TTGGGTTGTA TGAGCAGGTT
GTCGAGAGCA AGGGGCAGCG GTTGCTGTTG CGCGCGCCGG AGATGCCGTG TTTGGTGTTG
GGTGATGCAA CGCGCTTGCG GCAGATATTC GAAAATTTGT TGTCTAATGC GATCAAATTT
ACTCCAACGG ATGGCTGCAT TGATGTGGAG ATTGATGCCG ATGGCGACAG TTTCCGAGTA
TCGGTGACGG ATTCTGGTGA TGGGATCGCT GCCGAATTTC TACCGCATTT GTTTAGTCGG
TTTCGTCAGG CTGATGGTAC GACGACCCGT TGTCACGGTG GGCTTGGTCT GGGGTTGGCG
ATTGTGCAGA GTTTGGTGGA AATGCATGGG GGTTATGTTG GTGCGACCAG TCCGGGGCTT
GGTAAGGGTG CAATGTTCAC GGTGTCTTTG TTGCGTTATG TATGTGCGAT CGATGTTGCC
GATACTGTGA TCTGTGATCG GCGTGTTGGA TCAGCAGGCG ACCAAGGGGA GTATTGA
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| Protein sequence | MDSTLSGADQ FRGPWWLLQV LSSTDFLLDI SPPLVLQSFD IPSDVYREML CTLEAGFCIV
QIVLDDGQPV DGIFRLTNAS FGRHLRLDSV VGESVCGIMP DDGPEYIKRY GGVALSGQRV
HFEARALRRW YSVEVMRVGA PEGRLLGVLF VDITEHKRME RRLAESEVRF NILADGLPMP
VWVFDAQGGM RFVNTAYGEF FGVDLSSGTV PEWSMVLHPE DVLIFEFKLS AALKTQSALR
ALVRARRYDG QWRWIEMSAT PRYSPDGHFI GLTGNSPDVT ERLEIELVRE QLLKSERAAR
NEAENMARLK DEFLSTLSHE LRTPLTTILG WSELLLQRIE EQHPCYKGLS VIASSAKVQK
RLISDMLDLS SMLLGKMQLE MEVLDLVEQI REVIGLYEQV VESKGQRLLL RAPEMPCLVL
GDATRLRQIF ENLLSNAIKF TPTDGCIDVE IDADGDSFRV SVTDSGDGIA AEFLPHLFSR
FRQADGTTTR CHGGLGLGLA IVQSLVEMHG GYVGATSPGL GKGAMFTVSL LRYVCAIDVA
DTVICDRRVG SAGDQGEY
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