| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1965 |
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| Symbol | |
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| ID | 6121048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2051333 |
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| End bp | 2053711 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641649918 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_001776467 |
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| Protein GI | 170731034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCC ATTCCCCCTG GTGGGGCTGG CTGATCGCTT GCGCCTTGGC AGGCTTGGCG
CTTGCCATGG GCTTTCTGGT CCCTTACACG CTTTACCTGA ATCAGCAGGT GACCGCTCGC
TTTGGTGAGC TGCGCTGGCA GATCCCAACC CGGGTCTATG CTCGCCCTTT GATGCTACAA
CCGGGCATGG CATTAGATGC GCGCACGTTG AAGATCGAAC TGGATGCTGC ATCCTATCGT
GAGGACAATC ACGGCGAGTT ACCAGGCACC TACCAACAAC AAAATGGCCG CTTCACTGTC
TCCAGCCGTG GCTACGTTGA TGTGGATGGT GCAATACCAG CAAGCCGTCT GATCATCACA
CTGAACAACA ACCAAGTGTC TGCACTGCGG AAGGCAGATA CACGCAAACC AATCAGGCGC
GGGCGACTGG ATCCAGCACG CATCGCCACA CTGTACGGCC AGAAGCAGGA AGAACGCCGT
TTGGTCAGGT TGGAGGAAGT TCCCCAACTG CTCGTTACCG GCTTACAAGT GGTGGAAGAC
CGCGATTTCA AACATCACCA CGGCATCGAC ATCACCAGCA TTTTGCGCGC AGCCTGGGTG
ATGGTGCGTT CCGGCGGTGG CGTTCGCCAA GGTGCCAGTA CCCTAACGCA ACAGCTAGCG
CGTAGCGGAC TGCTTGGTAT CGGCAAAGAA CAGACGTTGC AGCGCAAATG CAACGAAATC
CTGTATGCAC TGATCCTGGA GGCACGCTAC TCCAAGCGCG TTATCCTGGA GTCCTATCTC
AATCAAGTCT ACCTGGGTCA ACGTGGCAGC CAGGCCGTAC ATGGTGTCGC AACTGGCGCG
GAGTTCTGGT ATGGACGTGA GCTAGGCTCG CTCACTACTG AACAGGTCGC CCTGCTCATC
GGACTGGTCA AAGGACCTTC GTACTACGAT CCACGCCGTT TCCCTGATCG CGCATTGTCC
CGACGCAATT TCGTGCTTGG CAAACTGCAT GAAAACAAAC TGATCGACGA TGCTGAATAC
ATGCGCGCCC AAGCATCGCC CCTAGGTGTC CCCAAAGAAC CTGGCCTGGT TGCAGCCAAC
CGCTTCGTCG CGTACCTCGA CCTGGTACGC CGCCAGCTTG CTCACGATTA CCCAGAGAAT
GTGTTGCGTG GCGCAGGCAT GACCGTACTT ACCGGCATGT CGCCCTCAGC ACAAGCCTAT
GCTGAGAGAG GAGTACAAAC CACGCTCAGT GCACTGGAAA AGGTCAAGGG GCTGAAACGT
CCGCCACTGC AAGCCGGACT GGTACTGACG GACGTGCATA ACGGCGATGT CCTGGCCGTG
GTCGGTAGTC GCGATGCAAC CCAATCGGGT TTCAATCGTG CCATTGAAGC GCAACGCCAG
GTGGGTTCGC TGCTGAAACC GTTCGTCTAT CTACTAGCAC TGGCCTCACC GGATCGTTGG
TCCTTGTCCA GTTGGGTAGA AGACACCCCG GTCAACATAC CGCTGGCACA TGGACGCATT
TGGTCGCCAA GCAACTCAGA CAACATCAGC CACGGAACCG TGCGCTTGAT TGATGCATTG
GCACACTCTT ACAACCAAGC AACAGTGCGC GTTGGCATGC AGGTCGGCCC AGAACGTGTG
GCTCAATTGA TTAACGTTCT GGCCGGATTA AAAGCCGACG CCAACCCATC GCTGATCCTG
GGCGCAACCG ACCAAAGCCC TTATGCAATG ACGCAGCTCT ATCAGTTCCT GGCTTCTGGG
GGTGAAATCC AACCGTTGCA CGCAGTGCGC GGCGTACTCG ATCCGCAAAA CAAACTGCTC
AAACGCTATG ACAATACCCC GGCACCTGCA CAGCCCGGCG ACTCAGTCGC AGCCAACGTC
ATCAGCGTTG CGCTACAGGA AGTGGTCAAC AGCGGTACCG CGCGGCAACT CATCATCGAC
GGCTTGGGTC GGCTGTCCCC TGCCGGCAAA ACCGGAACCT CCAACGATGG ACGTGACAGC
TGGTACGCGG GCTACACCGG GAACCACTTG GCTGTCATTT GGGTCGGCAA CGACCAAAAC
GAGCAAACTG GCCTATACGG CGCCACCGGT GCCATGCGCG TTTGGTCGAG CATCTTCTCG
CAGTTACCAA GCACCAGATT ACAAGTCAAC GGCAAAGGAC TGGATTGGCA GTCAGTCGAG
CCTATGGGCA CTGGCACCAC AGACGCAAAC TGCCCAGGCG CACGCCGCTT TCCGTTTGTA
GCCGGCTTCG CTCCGCCTTA TGCAGCATGC TCTGGTGCTG GCGGAGCACC CGAAGCAGGG
CATAATATCG GCTGGCGTAA CTGGTTCGGG CTGGATAAGC AGAAGGGGGA CCAAGCATCG
CCCCCCATAA CGCCTCCTCC CGATCAATCG ACACAATGA
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| Protein sequence | MLGHSPWWGW LIACALAGLA LAMGFLVPYT LYLNQQVTAR FGELRWQIPT RVYARPLMLQ
PGMALDARTL KIELDAASYR EDNHGELPGT YQQQNGRFTV SSRGYVDVDG AIPASRLIIT
LNNNQVSALR KADTRKPIRR GRLDPARIAT LYGQKQEERR LVRLEEVPQL LVTGLQVVED
RDFKHHHGID ITSILRAAWV MVRSGGGVRQ GASTLTQQLA RSGLLGIGKE QTLQRKCNEI
LYALILEARY SKRVILESYL NQVYLGQRGS QAVHGVATGA EFWYGRELGS LTTEQVALLI
GLVKGPSYYD PRRFPDRALS RRNFVLGKLH ENKLIDDAEY MRAQASPLGV PKEPGLVAAN
RFVAYLDLVR RQLAHDYPEN VLRGAGMTVL TGMSPSAQAY AERGVQTTLS ALEKVKGLKR
PPLQAGLVLT DVHNGDVLAV VGSRDATQSG FNRAIEAQRQ VGSLLKPFVY LLALASPDRW
SLSSWVEDTP VNIPLAHGRI WSPSNSDNIS HGTVRLIDAL AHSYNQATVR VGMQVGPERV
AQLINVLAGL KADANPSLIL GATDQSPYAM TQLYQFLASG GEIQPLHAVR GVLDPQNKLL
KRYDNTPAPA QPGDSVAANV ISVALQEVVN SGTARQLIID GLGRLSPAGK TGTSNDGRDS
WYAGYTGNHL AVIWVGNDQN EQTGLYGATG AMRVWSSIFS QLPSTRLQVN GKGLDWQSVE
PMGTGTTDAN CPGARRFPFV AGFAPPYAAC SGAGGAPEAG HNIGWRNWFG LDKQKGDQAS
PPITPPPDQS TQ
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