Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1930 |
Symbol | |
ID | 6120210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2008719 |
End bp | 2009873 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649885 |
Product | hypothetical protein |
Protein accession | YP_001776434 |
Protein GI | 170731001 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC TCTTCCGTAC GGCCGCCATC GCTGCACTGC TGACCGTTAC GACCTATGCT GTCGCCCTTG AAAAGGGGGA TAAACATCCG GATACCTATA CCGTCCAAAA AGGCGACACG CTTTGGGGAC TTGCCAAACG TCTTTTCAAA AAACCCTGGC TGTGGCCTGA AATCTGGCAA GCTAACCCGC AGATCAACAA CCCGCATTTG ATCTACCCCG GCGACGTGAT CAGCTTGGCC TACCTGAATC GCATGGCCAA GGACACGATT GCCGATCCAG GCAAGGCCAT ACAACCAGGA CCACGTCAGG ACGCACCGAT TGATGCCATA CCATTGGTGC AGATTGAGCC GTTTCTGAAA GATCTGCAGA TTACAGACAA TTTCGAAAAG CTGCCCTACG TGGTCGGCCT TGAAGAAGGG CGCCTGCGCG GTACCTATGG TCAAGCCGCC TACGCTGTCG GCTTGATTGG CGCAGAACCA GGCCAACGTT ACGCAGTGAT GCGCCCAACG GTCAGCTACT CTCTACCTAA ACCCACCGAA GACCTATTGA TGGACAATCA ACCCACCATC AATAGCGGTG TGCTCTGGAA AGAATATATC GCTCCAAGCA AACACCGGGG ATTCCTGGGC TACGAACTGG CCAAAGTCAA CGTTGCGACC GTGGCTCAAG TCGGCCATGA CAACCAGACA ACCACTCTGA CACTACAAAC GGGTGGGCGC GAGGTACGTG CTGGAGATCG TTTGATCCCC CTGGAAGCAA AACCTTACGA CCTTCAATTT TTCCCCCATC CACCGGCCGC CGAGGTAAAA GATGCGGACC TGCGTGTCCT GGCCGTGGCT GATGCCTTCA TCGCTAGCGG CCCCCGCGAT GTGATTGCTA TCTCTGGTGG CAGCAATAAC GGCATCAATA ATGGCACCGT ATTTTCGATC TGGCGCCAAG GTCACTACAT CAACGACCGA ATCGGACACC GTGCCTCAAC ATCACATGTG AACGACAGCT TCGAAGCTGA TAAAGGCACT GTGCTGCAAC CCGACGAGTA CACCGCACAC GCGATGGTGT TCCGTACTTT TAACGATGTC AGCTATGCAC TAGTGATGGA TGGAACTAAG CCCGTCAAAG TGGGCTATAC GCTGAGGCAC CCAGACGCAC AGTAA
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Protein sequence | MFKLFRTAAI AALLTVTTYA VALEKGDKHP DTYTVQKGDT LWGLAKRLFK KPWLWPEIWQ ANPQINNPHL IYPGDVISLA YLNRMAKDTI ADPGKAIQPG PRQDAPIDAI PLVQIEPFLK DLQITDNFEK LPYVVGLEEG RLRGTYGQAA YAVGLIGAEP GQRYAVMRPT VSYSLPKPTE DLLMDNQPTI NSGVLWKEYI APSKHRGFLG YELAKVNVAT VAQVGHDNQT TTLTLQTGGR EVRAGDRLIP LEAKPYDLQF FPHPPAAEVK DADLRVLAVA DAFIASGPRD VIAISGGSNN GINNGTVFSI WRQGHYINDR IGHRASTSHV NDSFEADKGT VLQPDEYTAH AMVFRTFNDV SYALVMDGTK PVKVGYTLRH PDAQ
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