Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1919 |
Symbol | |
ID | 6120199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1999478 |
End bp | 2000359 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649876 |
Product | putative lipoprotein |
Protein accession | YP_001776425 |
Protein GI | 170730992 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.527039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAAC GTCCTACCTT CTTCACACCC ACCCACCTGT TGGCCATGCT ACTGGCTACC TTCATCCTCA TCACCGGCTG TCACCGCGAG ACCAAAAAGA ACGCTGATGA TGGCATGCCG GTGGAACATC TGTACGACAA GGCACACACG CTCATGAAGA AAGGTAACTG GGCCGGTGCC GAGGTCAGCT TCAAGCGCCT CATTGCCCAA TACCCGTATG GCCCGTATAC CGAACAAGCA ATGGTCGAGA ACGCCTACGC ACAGTACAAG TCGGGCAAAC ACGACGACGC TGTATCATCA ATCGACCGCT TCATACGCAC TTACCCGACG CACCATAACA TCCCCTATAT GTACTACCTG CGGGGCCTGA GCAACAGCAA CCGCGACACC ATATTTTTAC GCAAAGTCTG GTCACTGGAC CTCAGTCGCC GTGACTTATC CGCCCCACAG CAAGCCTACA ACGACTTCAA AACCGTTCTG GATCGCTACC CAAACAGCCG TTACGCTGCC GATGCCAAGA AGCAAATGAC TGAGCTGCGT AACATGTTCG CCCAATACGA GATGAACGTT ACACTCTACT ACTTGCGCCG CACGGCTTGG GTCGCAGCCG CAGGCCGCGC CAACTTTCTG CTAGAAACCT ACCCACAGAG CCCCTTCCAA TACGATGCAG TGGCCGCCCT TGGAGAGGCT TACACCCATT TGGGTAACAA GACACTTGCA GACAATGCAC GCCAGGTATT GCAAACCAAT GCCCCCGACC ATCCATGGCT CAAAGGCAAA AAATGGCCCA AATACCCGGC AGCAATCCGC AAGCTGAACC CATTCGCAGG TGAAAAATCA GCAGTAACCG GACAGACTAA CGCCATTGTA AATTCCAATT AA
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Protein sequence | MIQRPTFFTP THLLAMLLAT FILITGCHRE TKKNADDGMP VEHLYDKAHT LMKKGNWAGA EVSFKRLIAQ YPYGPYTEQA MVENAYAQYK SGKHDDAVSS IDRFIRTYPT HHNIPYMYYL RGLSNSNRDT IFLRKVWSLD LSRRDLSAPQ QAYNDFKTVL DRYPNSRYAA DAKKQMTELR NMFAQYEMNV TLYYLRRTAW VAAAGRANFL LETYPQSPFQ YDAVAALGEA YTHLGNKTLA DNARQVLQTN APDHPWLKGK KWPKYPAAIR KLNPFAGEKS AVTGQTNAIV NSN
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