Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1878 |
Symbol | |
ID | 6121599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1958687 |
End bp | 1960072 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641649839 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001776389 |
Protein GI | 170730956 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.127884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACTC AATTGCCCGA CGCACTGATC ACTACTCTGT CCACTCTCCT GGGCTCGGAA GGCTGGCGCC TTGATGCCAT CAGTCGCCGC CAGTACAGCG AAGACGACTC GCAGTGCTTT TCCTGTGCCG ATGCAGTGGC GCTGCCACGT GACCTCAACG AGGTAGTGGC AATCGTACGT GCCTGCCGTC AACATCGCGT GCCAGTGATC CCACGAGGTA CCGGGACTGG CACCGTGGGT GGTGCAGTGC CGCTCCATGG CGGCATCGTT CTGTCATTGG CACGTATGAA CCGTATCGTC GCGCTGCTGC CAGATGATCG CTGCGCAGTG GTACAGCCTG GGGTGATCAA CAATGACTTA CAACAAGCAC TGGCACCACA TGGGCTTTTT TGGCCACCAG ATCCGTCCAG TACAGCGATG TGCAGTATCG GCGGCAATCT TGCAACGAAT GCCGGTGGCC CGCGTACGGT GAAGTACGGT GCCACACGAG ATAACGTACT TGGCGTCGTC GCAGTGACCG GTGTCGGCGA TGTGATCCGC TGTGGCGGTG CTTATACGAA GAACGCCACC GGTTACGATC TGGCACATTT GTTGATTGGC AGTGAAGGCA CATTAGCAAT CATCGTCGAA GCCACGCTAA AGCTGGCACC ACAACCACAA GCTATCGCTG GCCTGCGTGC GTTCTATCAA GATACGGCCG CTGCCGCTGC CGCAGTGTCA CGACTGATGT CACAACCGGC AATACCAGCA ACGCTGGAGT TCATGGACCA CAAAGCAATC GAGCTGCTGT ATCGCAATGG CAGCAATATT CCTATGGCCG GCGCGATGCT GCTGATTGAA GGAGACGGCA ATCACGACAC GCTTCCCTAT GTATTACAAG CACTGGCGCA AGCCGCTTCA GGTGAAGGGC TGATGGACCT TGACGTGGCC ATGGATGGAG CCGCACGCGA TCAGCTATGG GCGGCACGCA AGTCACTATC GCCAATGCTT CGCACGATTA AACCTGGAAA ACTAAACGAA GACGTTGTTG TTCCCGTCTC GCGTATTCCT GATTTGGTTG CTGGCATAGA AGTATTGGCT GCCGAGAGCG GATTACCCAT TGTCACATTT GGGCACGCCG GTAACGGAAA TCTACATGTG AATATCATGT ATGACGATCA GGATGCGGAA GACATTATGC GGGCGCAGGC AACGCTACCA AAGCTATTTA AGTTAGTTTT GACTCTTGGA GGCACCCTGT CAGGTGAGCA CGGGATTGGC GTAGCCAAAC GTGACTTCAT GACACAAGCA TTCGACACAC CAACGCTAGC AGCAATGCGT GCGATCAAGG CCGCATTCGA TCCAGACGGT ATTCTCAATC CAGGTAAAGT GCTACCCAGA GTCTAA
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Protein sequence | MDTQLPDALI TTLSTLLGSE GWRLDAISRR QYSEDDSQCF SCADAVALPR DLNEVVAIVR ACRQHRVPVI PRGTGTGTVG GAVPLHGGIV LSLARMNRIV ALLPDDRCAV VQPGVINNDL QQALAPHGLF WPPDPSSTAM CSIGGNLATN AGGPRTVKYG ATRDNVLGVV AVTGVGDVIR CGGAYTKNAT GYDLAHLLIG SEGTLAIIVE ATLKLAPQPQ AIAGLRAFYQ DTAAAAAAVS RLMSQPAIPA TLEFMDHKAI ELLYRNGSNI PMAGAMLLIE GDGNHDTLPY VLQALAQAAS GEGLMDLDVA MDGAARDQLW AARKSLSPML RTIKPGKLNE DVVVPVSRIP DLVAGIEVLA AESGLPIVTF GHAGNGNLHV NIMYDDQDAE DIMRAQATLP KLFKLVLTLG GTLSGEHGIG VAKRDFMTQA FDTPTLAAMR AIKAAFDPDG ILNPGKVLPR V
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