Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1874 |
Symbol | |
ID | 6121595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1955170 |
End bp | 1957341 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649836 |
Product | GTP diphosphokinase |
Protein accession | YP_001776386 |
Protein GI | 170730953 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.730931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATG TTTCCTTGAT CCAGACAGAT CACACCGCAC TCCCGTTGGC TGATACGAAG TTACCTGATT ACTTCCTGCA GCTGGAGCGC ATGGCTGCTC ATTTAACACA TGAGCAATTG ATGGCGCTGC GTCGCGCCTG GGTGATGGGT ATGGCTGCGC ATGCTGGGCA GACACGTAAA TCTGGTGAGC CGTATATCAC CCATCCTGTG GCTGTGGCTT GTGTATTGGC CGACTTAGGT ATGGATGTAG AGACATTAAT TGCGGCGATC CTTCACGACA CCATTGAGGA CACCTCTGTG ACTCGTGAAA TACTCGCTGC CGAGTTTGGC GAGACCGTCG CGGACTTGGT GGATGGTGTC ACTAAGTTAG ACAAACTGAA GTTCCGGAAT CGTCAGGAAG CAGCCGCTGA GAGCTTCCGT AAAATGCTGT TAGCGATGTC GCGTGATTTG CGTGTGATCA TGATCAAACT GGCTGATCGC TTGCACAATA TGCGCACCCT TGGCGCGCAG AGTATTGAGG CGCGTAGCCG CATTGCACGT GAGACGCTGG AGATTTACGC GCCGATTGCT CAGCGTCTTG GCATGGCACT GATGAAATCC GAGCTTCAAA ACCTTGGATT TCGTGCATTG CATCCGTGGC GCCACGCCAT CATCGAGAAA CATATTCTCA ACCAACCCGT GGTGCGCCGT GAGGCGATGG AACGCGTCGA ATTGCAGTTG TCCGGGCGCT TGATACAAGA GGGAGTGCAG CACCGTGTAG TGAGTCGGAT CAAGACTCCG TGGAGCATCT ACAACAAGAT GCACGACGAT AACAAATCTT TCGATCAAGT GATGGATGTC TTCGGATTTC GATTGGTTGT TAAGAGCGTT GCTGATTGTT ACCACGCATT GGGTATCGTG CATGGCACTT TAAAACCTTT AGATGGACGG TTCCGGGATT TCATCGCGAT TCCCAAAATA AATGGCTACC AGTCGCTGCA TACCGTTCTA TTTGGCCCAT ACGGCTCCCC GATCGAAGTG CAGATTCGTA CCGAAGAGAT GGATATGATT GCTGAACGCG GCATTGCCGC ACACTGGGCC TACAAGTGTG GCAGCGATTC GCCGAATAGC GCGCAGAGCC GCGTTCATAC CTGGATTGCC GAATTGCTCG AATCACAGCG CACCGCGATT TCCTCAATGG AATTCTTGGA TAACTTCAAG GTTGATCTAT TTCCAGATGA GGTCTATTTA TTCACGCCCA AGGGCAAGAT CTTTGCTTTG CCCAAAAATT CCACTGCTCT TGATTTCGCT TATGCGGTGC ATACCGATAT TGGCAATCAT GCCGTGACCT CCCGGGTGGA TAAACAGCTG ATGCCACTGC GTACCAAACT CTCTAGTGGA CAAACTGTGG AAATCATCAC GGCACGCTCT GCCTTACCCA AACCGCAATG GTTGGAATTC GTAGTTAGCA GCAAGGCACG TACTGCAATC CGCCATCAAC TCAAACAGCT TCAACACGAG GATGCCGTAC AACTGGGTCA CCGCATGCTT GATCGTGCGT TGGAAGCCAT GGACAGCTCG TTGGAACGTC TGCCCAAGGG CCGACTGGAT GCCTTCCTGG CTGAACATCA CTTTCAGCGC TTAGAGGCCT TGCTTGCTGA CATCGCCTTG GGTAACTGGA TGCCTAATCA GACCGCACAA GCATTGCTGA CTTACACGGA ATTGCTTGGC AACACGCCGA TTGAGCACTC ACGCGAGAAA ATTTTGATCA ATGGTAGCGA GCGTGGCGTT ATCAGCTTTG CAAACTGCTG TCAACCAATT CCTGGTGATG ATGTGATGGG CTACCACACC ACTGGAAAGG GGATCGTTGT CCATCGCCTG GATTGTCCAA ACCTGAATGA ATTGCGTAAA TCACCTGAGC GTTGGGTGCC GATTGATTGG GATTTAAACG TTTCTGGTGA TTACGATGCC TCGTTACTCG TCGAAGCTGA GAATCGCACT GGCGTACTGG CCCAATTAGC TGCGGCGATC GCGCAGAGCC ATTCCAATAT TGAACATGTT GACTACCTGG AGCGCGACTT TAATGCAGCC CTACTGCGCT TCAGTATCCA GGTGCGTGAC CGCCGTCACC TAGCCGAAGT GATGCGCCGG TTACGCCGCT TGCCCGCAGT ACAGAGTGTA TATCGCCAAT AG
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Protein sequence | MTHVSLIQTD HTALPLADTK LPDYFLQLER MAAHLTHEQL MALRRAWVMG MAAHAGQTRK SGEPYITHPV AVACVLADLG MDVETLIAAI LHDTIEDTSV TREILAAEFG ETVADLVDGV TKLDKLKFRN RQEAAAESFR KMLLAMSRDL RVIMIKLADR LHNMRTLGAQ SIEARSRIAR ETLEIYAPIA QRLGMALMKS ELQNLGFRAL HPWRHAIIEK HILNQPVVRR EAMERVELQL SGRLIQEGVQ HRVVSRIKTP WSIYNKMHDD NKSFDQVMDV FGFRLVVKSV ADCYHALGIV HGTLKPLDGR FRDFIAIPKI NGYQSLHTVL FGPYGSPIEV QIRTEEMDMI AERGIAAHWA YKCGSDSPNS AQSRVHTWIA ELLESQRTAI SSMEFLDNFK VDLFPDEVYL FTPKGKIFAL PKNSTALDFA YAVHTDIGNH AVTSRVDKQL MPLRTKLSSG QTVEIITARS ALPKPQWLEF VVSSKARTAI RHQLKQLQHE DAVQLGHRML DRALEAMDSS LERLPKGRLD AFLAEHHFQR LEALLADIAL GNWMPNQTAQ ALLTYTELLG NTPIEHSREK ILINGSERGV ISFANCCQPI PGDDVMGYHT TGKGIVVHRL DCPNLNELRK SPERWVPIDW DLNVSGDYDA SLLVEAENRT GVLAQLAAAI AQSHSNIEHV DYLERDFNAA LLRFSIQVRD RRHLAEVMRR LRRLPAVQSV YRQ
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