Gene Xfasm12_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1874 
Symbol 
ID6121595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1955170 
End bp1957341 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content52% 
IMG OID641649836 
ProductGTP diphosphokinase 
Protein accessionYP_001776386 
Protein GI170730953 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.730931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATG TTTCCTTGAT CCAGACAGAT CACACCGCAC TCCCGTTGGC TGATACGAAG 
TTACCTGATT ACTTCCTGCA GCTGGAGCGC ATGGCTGCTC ATTTAACACA TGAGCAATTG
ATGGCGCTGC GTCGCGCCTG GGTGATGGGT ATGGCTGCGC ATGCTGGGCA GACACGTAAA
TCTGGTGAGC CGTATATCAC CCATCCTGTG GCTGTGGCTT GTGTATTGGC CGACTTAGGT
ATGGATGTAG AGACATTAAT TGCGGCGATC CTTCACGACA CCATTGAGGA CACCTCTGTG
ACTCGTGAAA TACTCGCTGC CGAGTTTGGC GAGACCGTCG CGGACTTGGT GGATGGTGTC
ACTAAGTTAG ACAAACTGAA GTTCCGGAAT CGTCAGGAAG CAGCCGCTGA GAGCTTCCGT
AAAATGCTGT TAGCGATGTC GCGTGATTTG CGTGTGATCA TGATCAAACT GGCTGATCGC
TTGCACAATA TGCGCACCCT TGGCGCGCAG AGTATTGAGG CGCGTAGCCG CATTGCACGT
GAGACGCTGG AGATTTACGC GCCGATTGCT CAGCGTCTTG GCATGGCACT GATGAAATCC
GAGCTTCAAA ACCTTGGATT TCGTGCATTG CATCCGTGGC GCCACGCCAT CATCGAGAAA
CATATTCTCA ACCAACCCGT GGTGCGCCGT GAGGCGATGG AACGCGTCGA ATTGCAGTTG
TCCGGGCGCT TGATACAAGA GGGAGTGCAG CACCGTGTAG TGAGTCGGAT CAAGACTCCG
TGGAGCATCT ACAACAAGAT GCACGACGAT AACAAATCTT TCGATCAAGT GATGGATGTC
TTCGGATTTC GATTGGTTGT TAAGAGCGTT GCTGATTGTT ACCACGCATT GGGTATCGTG
CATGGCACTT TAAAACCTTT AGATGGACGG TTCCGGGATT TCATCGCGAT TCCCAAAATA
AATGGCTACC AGTCGCTGCA TACCGTTCTA TTTGGCCCAT ACGGCTCCCC GATCGAAGTG
CAGATTCGTA CCGAAGAGAT GGATATGATT GCTGAACGCG GCATTGCCGC ACACTGGGCC
TACAAGTGTG GCAGCGATTC GCCGAATAGC GCGCAGAGCC GCGTTCATAC CTGGATTGCC
GAATTGCTCG AATCACAGCG CACCGCGATT TCCTCAATGG AATTCTTGGA TAACTTCAAG
GTTGATCTAT TTCCAGATGA GGTCTATTTA TTCACGCCCA AGGGCAAGAT CTTTGCTTTG
CCCAAAAATT CCACTGCTCT TGATTTCGCT TATGCGGTGC ATACCGATAT TGGCAATCAT
GCCGTGACCT CCCGGGTGGA TAAACAGCTG ATGCCACTGC GTACCAAACT CTCTAGTGGA
CAAACTGTGG AAATCATCAC GGCACGCTCT GCCTTACCCA AACCGCAATG GTTGGAATTC
GTAGTTAGCA GCAAGGCACG TACTGCAATC CGCCATCAAC TCAAACAGCT TCAACACGAG
GATGCCGTAC AACTGGGTCA CCGCATGCTT GATCGTGCGT TGGAAGCCAT GGACAGCTCG
TTGGAACGTC TGCCCAAGGG CCGACTGGAT GCCTTCCTGG CTGAACATCA CTTTCAGCGC
TTAGAGGCCT TGCTTGCTGA CATCGCCTTG GGTAACTGGA TGCCTAATCA GACCGCACAA
GCATTGCTGA CTTACACGGA ATTGCTTGGC AACACGCCGA TTGAGCACTC ACGCGAGAAA
ATTTTGATCA ATGGTAGCGA GCGTGGCGTT ATCAGCTTTG CAAACTGCTG TCAACCAATT
CCTGGTGATG ATGTGATGGG CTACCACACC ACTGGAAAGG GGATCGTTGT CCATCGCCTG
GATTGTCCAA ACCTGAATGA ATTGCGTAAA TCACCTGAGC GTTGGGTGCC GATTGATTGG
GATTTAAACG TTTCTGGTGA TTACGATGCC TCGTTACTCG TCGAAGCTGA GAATCGCACT
GGCGTACTGG CCCAATTAGC TGCGGCGATC GCGCAGAGCC ATTCCAATAT TGAACATGTT
GACTACCTGG AGCGCGACTT TAATGCAGCC CTACTGCGCT TCAGTATCCA GGTGCGTGAC
CGCCGTCACC TAGCCGAAGT GATGCGCCGG TTACGCCGCT TGCCCGCAGT ACAGAGTGTA
TATCGCCAAT AG
 
Protein sequence
MTHVSLIQTD HTALPLADTK LPDYFLQLER MAAHLTHEQL MALRRAWVMG MAAHAGQTRK 
SGEPYITHPV AVACVLADLG MDVETLIAAI LHDTIEDTSV TREILAAEFG ETVADLVDGV
TKLDKLKFRN RQEAAAESFR KMLLAMSRDL RVIMIKLADR LHNMRTLGAQ SIEARSRIAR
ETLEIYAPIA QRLGMALMKS ELQNLGFRAL HPWRHAIIEK HILNQPVVRR EAMERVELQL
SGRLIQEGVQ HRVVSRIKTP WSIYNKMHDD NKSFDQVMDV FGFRLVVKSV ADCYHALGIV
HGTLKPLDGR FRDFIAIPKI NGYQSLHTVL FGPYGSPIEV QIRTEEMDMI AERGIAAHWA
YKCGSDSPNS AQSRVHTWIA ELLESQRTAI SSMEFLDNFK VDLFPDEVYL FTPKGKIFAL
PKNSTALDFA YAVHTDIGNH AVTSRVDKQL MPLRTKLSSG QTVEIITARS ALPKPQWLEF
VVSSKARTAI RHQLKQLQHE DAVQLGHRML DRALEAMDSS LERLPKGRLD AFLAEHHFQR
LEALLADIAL GNWMPNQTAQ ALLTYTELLG NTPIEHSREK ILINGSERGV ISFANCCQPI
PGDDVMGYHT TGKGIVVHRL DCPNLNELRK SPERWVPIDW DLNVSGDYDA SLLVEAENRT
GVLAQLAAAI AQSHSNIEHV DYLERDFNAA LLRFSIQVRD RRHLAEVMRR LRRLPAVQSV
YRQ