Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1842 |
Symbol | |
ID | 6121563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1915892 |
End bp | 1916575 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649808 |
Product | response regulator receiver protein |
Protein accession | YP_001776358 |
Protein GI | 170730925 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCC TTTTGGTCGA AGATGAGGCC CCATTGCGTG AGACGCTGGC TGCGCGTTTG AAGCGTGAAG GTTTCGCGGT TGATGCCGCC CAGGATGGTG AAGAAGGCAT TTACATGGGG CGTGAGGTGC CGTTCGATGT TGGTATTATT GACTTGGGCT TACCTAAGAT GTCTGGTATG GATCTTGTCA AAGCTTTACG TGACGAAGGT AAGAAGTTTC CAGTCTTAAT ATTGACGGCG CGCTCTAGTT GGCAGAGTAA GGTTGAGGGG CTGAAGCAAG GAGCTGATGA CTACTTGGTT AAGCCTTTCC ATGTGGAGGA GTTGTTAGCA CGCGTCAATG CTTTGCTGCG TAGGGCTGCT GGTTGGAGTA AGCCAACTCT TGAATGCGGT TCTGTAGCGC TTGACCTTGC TGCGCAGACG GTGAGCGTTA ATGGGACCAA TGTGGATCTT ACCAGTTACG AGTACAAGGT GCTTGAATAC TTGATGGTGC ATGCTGGTGA ATTGGTTTCT AAGGCTGATT TGACCGAGCA TATTTATCAG CAGGATTTCG ATCGTGATTC AAATGTGCTT GAGGTGTTTA TCGGTCGCTT GCGTAAGAAG CTGGATGCAG ATGGTGACCT GAAGCCGATT GAGACAGTGC GTGGTCGCGG GTATCGTTTC GCAATTGCCC GCAACGAAAA TTAA
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Protein sequence | MRILLVEDEA PLRETLAARL KREGFAVDAA QDGEEGIYMG REVPFDVGII DLGLPKMSGM DLVKALRDEG KKFPVLILTA RSSWQSKVEG LKQGADDYLV KPFHVEELLA RVNALLRRAA GWSKPTLECG SVALDLAAQT VSVNGTNVDL TSYEYKVLEY LMVHAGELVS KADLTEHIYQ QDFDRDSNVL EVFIGRLRKK LDADGDLKPI ETVRGRGYRF AIARNEN
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