Gene Xfasm12_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1771 
Symbol 
ID6121009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1838198 
End bp1839766 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content52% 
IMG OID641649743 
Producthypothetical protein 
Protein accessionYP_001776295 
Protein GI170730862 
COG category[T] Signal transduction mechanisms 
COG ID[COG4943] Predicted signal transduction protein containing sensor and EAL domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACGTT GTTGGACTCT TATCGTTGGT GCCACGCTTT GCATAGCGTG TCTTTCTGTT 
TCAGTTGCAT TGACTGATGA CTACGTTTGG GTGACGACGC AGCGTCACGA ACAACAGCGC
CTGCGCGACT TGGCGCAGCA AATGGGTCAG CGGGTGGATC GCGCCGTTTC CGAATCATTG
CTGCTCCTGT CAGACATGGA TCATGCGCAC TTGGCCCCGT GTTCTCCAGA ACACATCGTA
CGGATGCGTG CATTGGTGCT GGCTACCCGC TACATCACAG AACTTGACTA TGCCCCGACA
CAGAAACTGA GCTGTACATC GTGGGGACCG TTTGATGGTG CACTCAAGCA GACGTTGGCC
AGCGATGCCA GAAACGATGG CCTTGAATTG GTGAAGCGGG TGTCTTTACC GCTGAACTCT
GAGCAGCGCC TGCTGGGCTT GCATCATGGT GACTACCATG CACTGATGAA GCTCAGCACC
TTTATGGATT TTCCAATTCC ACCCGGTGTG GAATTGGCAC TGGCCACTAT GGATGGGGTG
CTGTTGCTGA GCACTGGTTC TCATGTGAAA GAACTGTTTG GTAACCCTGT GAATCAACCA
GCGAGTGATC CTTCGCATGA TGTGGTCGCA GCCCGCATTC AAAACCCTCA TCATGATTGG
CAGATCGCTG TCATTGAACC AATCCAACAG CTTGTGGGTG CGGTACATCG CAAAGAGTGG
CTGGCCATCC CGGTTGCCTT ATTGGTTTCA TTGAGTGTCA GCGGCTTAGC CATCCTGTAT
TTGCGCCGGC GGCGCGCTCC GTTGGCCCGG TTGCGTCAGG CGATCCAGCG ATGTGAATTC
TTTGTCTGCT ATCAGCCGAT TGTTTCACTG AGTGATGGGC GTTGCGTCGG TGCAGAAGCA
TTGGTGCGTT GGCGCCAGCA AGACGGTACA TTGATCTTGC CGGACCAATT CATTCCACTG
GCCGAGCGGA GTGGTTTAAT TCTTCCCATT ACCGATCAAG TCATCGCAGC GTCCATGCGT
GAATTAGGAC CATTACTGGT GGCTGATCGT TCGTTGCACA TTGCGATTAA TGTTTCAGTG
AAGGACATTG AATCAGGACG CGTACTGGAT GTATTGGCGC TTGCTTTACA AGACACTGGC
GTATACAGAA AACAACTGTG GATCGAGGCG ACTGAGCGCA GTTTCATGGA TGCACGTGCC
GCACGCGAGC ATATCGTGCG GCTACGAGAG GCTGGATATG CTGTAGTGAT TGATGATTTT
GGGACTGGTT ATTCAAATTT GCAGTATTTG CAGCAACTGC CATTAGACGC TTTGAAGATT
GATAAATCCT TCATTGATAC GGTTGGTCGC GATGTCACTA ACACAGCGGT TGCTTCGCAC
ATCATCGACA TTGCTAAGGA ATTGGGCATG CGTACCATCG CTGAAGGTGT GGAGCGTGAG
GAACAACTCG TCTATCTACG TGCCCGTGGT GTGGATATGG TTCAAGGCTG GTTATTCTCA
TCTCCGTTAA GCGCCGCTGA GTTCGTTGAC TATCTTTCCC ACAATCGCAG TATGCATCCC
GATGACTGA
 
Protein sequence
MKRCWTLIVG ATLCIACLSV SVALTDDYVW VTTQRHEQQR LRDLAQQMGQ RVDRAVSESL 
LLLSDMDHAH LAPCSPEHIV RMRALVLATR YITELDYAPT QKLSCTSWGP FDGALKQTLA
SDARNDGLEL VKRVSLPLNS EQRLLGLHHG DYHALMKLST FMDFPIPPGV ELALATMDGV
LLLSTGSHVK ELFGNPVNQP ASDPSHDVVA ARIQNPHHDW QIAVIEPIQQ LVGAVHRKEW
LAIPVALLVS LSVSGLAILY LRRRRAPLAR LRQAIQRCEF FVCYQPIVSL SDGRCVGAEA
LVRWRQQDGT LILPDQFIPL AERSGLILPI TDQVIAASMR ELGPLLVADR SLHIAINVSV
KDIESGRVLD VLALALQDTG VYRKQLWIEA TERSFMDARA AREHIVRLRE AGYAVVIDDF
GTGYSNLQYL QQLPLDALKI DKSFIDTVGR DVTNTAVASH IIDIAKELGM RTIAEGVERE
EQLVYLRARG VDMVQGWLFS SPLSAAEFVD YLSHNRSMHP DD