| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1720 |
|---|
| Symbol | |
|---|
| ID | 6121679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1790586 |
|---|
| End bp | 1791692 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641649698 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001776251 |
|---|
| Protein GI | 170730818 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCTG TTAACATTAC CAAGGATTTC CGATCAAGCT GCCGCCTCCC CGTGACAACT
CCAACCTCCC CCAGCACGAC ACCACTGACC TATCGCGATG CCGGAGTCGA CATCGACGCT
GGTAATGCAC TTGTCGAACG GATCAAGCCA TTGGTGAAAC GCAGCTTCCG GCCCGAAGTC
ATGAGTGGAC TGGGCGGCTT TGGTGCATTG TTCAACCTAG CAGGCAAATA CAAAGAACCT
GTGTTGGTCT CCGGAACGGA CGGAGTTGGC ACCAAATTGA AGTTGGCACA GCAATTGAAC
CGACACAATA CGATCGGAAT TGATTTAGTG GCGATGTGCG TTAACGACGT CCTGGTACAG
GGCGCCGAAC CCTTGTTCTT CCTGGACTAC TTTGCAACCG GCAAACTTGA TATAGACACC
GCCACGGCAG TCATCAGCGG TATCGCACTA GGCTGCGAGC AATCCGGCTG CGCACTGATC
GGCGGTGAAA CCGCCGAAAT GCCAGACATG TATCCACCCG GAGAATACGA TCTAGCAGGC
TTCTGTGTCG CTGCTGTCGA AAAATCGCAA CTCCTGGATG GCAGCCAAGT ACGCGAAGGC
GATGTCCTCA TCGGCATTGC CTCCTCAGGT CCACACTCAA ATGGCTATTC ATTGATCCGA
CGTATCTATG AGCGTGCCGG ATCACCTGCC GACCTGGATA TCCACGGAAC CCGCCTAATC
GACACATTAA TGGCGCCCAC CACGTTATAC GTCAAACCAA TACTGAAACT TCTACACACC
CACAGCGACG CAATCCACGC AATGGCCCAC ATCACCGGCG GCGGCTTGAC AGAGAACATC
ATCCGCGTGA TTCCACCCAA CCTGGGTTTG CGCATCGATG CCAACGCGTG GACACAACCG
CCCGTGTTCC AATGGCTACA GCGCGAAGGC GCGCTAGCCG ATACCGAAAT GTGGCGCACT
TTTAACTGTG GCATCGGCTT CGTATTAGTC GCCACACCCA ACCAGGTAGC CCCCCTAGGA
CAAGCACTTG ACAACCAAGG CTTGGCACAC TGGCAGATAG GCCGGGTCGT TACCCCTGTT
GGCAATGAGC GGGTACACAT CGACTGA
|
|---|
| Protein sequence | MHPVNITKDF RSSCRLPVTT PTSPSTTPLT YRDAGVDIDA GNALVERIKP LVKRSFRPEV
MSGLGGFGAL FNLAGKYKEP VLVSGTDGVG TKLKLAQQLN RHNTIGIDLV AMCVNDVLVQ
GAEPLFFLDY FATGKLDIDT ATAVISGIAL GCEQSGCALI GGETAEMPDM YPPGEYDLAG
FCVAAVEKSQ LLDGSQVREG DVLIGIASSG PHSNGYSLIR RIYERAGSPA DLDIHGTRLI
DTLMAPTTLY VKPILKLLHT HSDAIHAMAH ITGGGLTENI IRVIPPNLGL RIDANAWTQP
PVFQWLQREG ALADTEMWRT FNCGIGFVLV ATPNQVAPLG QALDNQGLAH WQIGRVVTPV
GNERVHID
|
|---|
| |