Gene Xfasm12_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1679 
Symbol 
ID6121639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1748861 
End bp1750093 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content61% 
IMG OID641649662 
Productphage-related integrase 
Protein accessionYP_001776215 
Protein GI170730782 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAAGC TGACGAAGAA CTACATCGAC AAGATCACCG CGCCCGCTGA CAAGGAGGCG 
TTCCACTGGG ATGACTCGCT CAAGGGGTTC GGCCTCCGGG TCACCCCTAC CGGCAAGATC
ACCTACATCG TGCAGGGGCG CGTCAATGGC AGTTCGCCCC GCATCAGCAT CGGCCCGCAT
GGGGTCTTCA CTGTCGATCA AGCCCGTGAT GTTGCCCGCG AACATCTGCG CAGCATGCGC
ATGGGCATCG ACCTGCGCGC CGTCGCCAAG AAGGAAGCCG CCCAGCGCGT CACCCTCCGC
GACGTGGCCG ACGGGTACAA GCGCGACCGT CCGCTGAAGG ACAGCAGCAA GGCCGAGATT
GAACGCCATG TGACCACAAC CTTTGAGGCA TGGCTCAAGA AGCCGCTCAA GGACATCAAC
CGCGAGGCGG TCACGAAGCG ATTCAACGAG ATCAAGACCA AGGGTACGAC GGGCAACGGC
CCAGCACCAG CGCAAGCGAA TCAGGCCTTC GCTGTGCTTC GCGCCTTGTT CAACTACGCC
ATCCGCGAAT ACCGCGAGCC GGACGGGTCG CCCGTGCTGA CGGACAACCC CGTTGATGTG
CTCTACAAGA AGTGGGCACC GCTCAAGCCG CGCACTAGCC GCGTGCCGGA TAGCAAGGTC
GGCGCGGTGT GGTCATTCCT CACCAAAGCC CGTGAGCAGG CATACAACCG TGACACGCTG
GCAAGCATTG ACCTTGTGAT GCTGCTCATG CTGACCGGCC TTCGGATCGG GGAATGCAGC
GAACTGACAT GGGATCGGGT CAATCTTGAG GAAGGCTGGA TTCACATCCC CGACCCGAAG
AACAGCAACC CCGTATGGCT GCCGCTATCC ACGCAGGCGG TGCAGTTGCT GACCACGCGC
CAGCGCGTCA AGGGTAGCCC GTTCGTGTTC TCGTCCTGGG GCAAGGCTGG GCACATCAAA
GACCCGCGCG ACACGATGAA GAAAGTCAGC GAGGTAGCGG GCACGAAGAT CACGCCGCAC
GACCTGCGCC GCACCTACAC GACCATCGGC GTGGCATCAG TGGGCATCGA CTTGCACAAG
GTCGAATTGC TGACGAACCA CGTTCCCAAG GGCGTGACAG CGCGCCACTA CCTTGAGACT
TCGCACCTGC AATATCTCAA GCCGGAGACG CAACGCATAT CTGACTGGAT CGAGCAGCAG
GCAGCAGCCT TAAACGACCG CTCAGAAAGC TAA
 
Protein sequence
MPKLTKNYID KITAPADKEA FHWDDSLKGF GLRVTPTGKI TYIVQGRVNG SSPRISIGPH 
GVFTVDQARD VAREHLRSMR MGIDLRAVAK KEAAQRVTLR DVADGYKRDR PLKDSSKAEI
ERHVTTTFEA WLKKPLKDIN REAVTKRFNE IKTKGTTGNG PAPAQANQAF AVLRALFNYA
IREYREPDGS PVLTDNPVDV LYKKWAPLKP RTSRVPDSKV GAVWSFLTKA REQAYNRDTL
ASIDLVMLLM LTGLRIGECS ELTWDRVNLE EGWIHIPDPK NSNPVWLPLS TQAVQLLTTR
QRVKGSPFVF SSWGKAGHIK DPRDTMKKVS EVAGTKITPH DLRRTYTTIG VASVGIDLHK
VELLTNHVPK GVTARHYLET SHLQYLKPET QRISDWIEQQ AAALNDRSES