| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1665 |
|---|
| Symbol | |
|---|
| ID | 6121624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1738061 |
|---|
| End bp | 1738747 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641649648 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_001776202 |
|---|
| Protein GI | 170730769 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.628404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG GATCTGCTGA TAAACCCGTG ATGCGTCGTG GCAGCGCAAT GACCCGTGCG
GAGATTCGGG AAGCATTTGT GCGATTACAA GAGATCAATC CACATCCAAC TACGGAGCTG
AAATACACCA CTGCATTTGA GCTGTTGATT GCCGTGATCT TGTCTGCACA GGCTACTGAT
ATTGGAGTGA ACAAGGCGAC ACGTCGACTG TATTCGCTTG CCAACACGCC ACAGGCAATC
TTGGATTTGG GCGAGGATGC CTTGAAGCGT CATATTTCCA CGATTGGCTT GTTTAATGCC
AAGGCCAAGA ATGTGATTGC TACTTGCCGG ATTCTGGTGG AGCAATACGG CGGTGCAGTT
CCGCGGGATC GTGCCATGCT GGAAGCATTA CCTGGTGTAG GGCGTAAAAC GGCCAATGTG
GTGCTTAACA CAGCCTTTGG CGAACCTACC ATGGCAGTAG ACACACATAT CTTCCGTGTT
GCCAACCGTA CTGGTTTGGC AATCGGCAGC AATGTACGAG CCGTTGAGGA TGCACTTCTC
AAACGCATCC CGCAGGAGTT TTTGAAGGAT GCGCATCACT GGCTGATTCT GCACGGCCGC
TATGTTTGCA AGGCACGCAA ACCGAACTGC TTACAGTGTG TGATTGCTGA TTTATGTCGC
TACAAGGACA AGACGCCAGC AGCTTAG
|
|---|
| Protein sequence | MTIGSADKPV MRRGSAMTRA EIREAFVRLQ EINPHPTTEL KYTTAFELLI AVILSAQATD
IGVNKATRRL YSLANTPQAI LDLGEDALKR HISTIGLFNA KAKNVIATCR ILVEQYGGAV
PRDRAMLEAL PGVGRKTANV VLNTAFGEPT MAVDTHIFRV ANRTGLAIGS NVRAVEDALL
KRIPQEFLKD AHHWLILHGR YVCKARKPNC LQCVIADLCR YKDKTPAA
|
|---|
| |