Gene Xfasm12_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1663 
Symbol 
ID6121622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1737077 
End bp1737739 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID641649647 
Productintegral membrane protein 
Protein accessionYP_001776201 
Protein GI170730768 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.771185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCGA AACTGCCTAC CGTCACCAAA GGTCTACTAC TCTCCAACGT CGTTATTTTC 
CTATTTCAGA TGATGTTGGG TGAGAACACC TTCGCAACAC TGATGCTGTG GCCGCTAGGC 
GGCAACAGCT TCGAAACATT GATATCAGGT GCCAGCTTCA TGCCTTGGCA GTTGCTGACC 
TACGGATTTC TGCATGAGGG TTTTCAACAC CTATTCTTCA ATATGCTCGC AGTCTTCATG 
TTCGGTGCGG CACTGGAGCA TACCTGGGGT GAGAAGCGCT TTTTGACGTA TTACCTGGTG 
TGTGTCGCCG GTGCTGGCGT ATGCCAGCTA TTGGTCAGTT GGCTGATGAG CAGTGGTACG 
CCAGTGCTTG GTGCGTCCGG TGGCGTGTTC GGTTTATTGA TGGCCTACGG GATGCTATTT 
CCCAATGAAC GTATCTTGCT GGTTTTTCCA CCGATTCCTA TGAAAGCAAG AACCTTTGTG 
ATTTTATACG GTGTCATCGA ATTGCTCATG GGCATCACTG GCATACAACC CAACGTCGCA 
CATTTCACAC ATCTAGGTGG CATGCTGTTT GGCTGGTTAC TGATCCGCTA CTGGCGTGGG 
CAACCCCCGT TCGGTGGTAG CGGACGTAAA CCCAAGCCAC CTTACATCCG TATGGTGCCC 
TGA
 
Protein sequence
MFPKLPTVTK GLLLSNVVIF LFQMMLGENT FATLMLWPLG GNSFETLISG ASFMPWQLLT 
YGFLHEGFQH LFFNMLAVFM FGAALEHTWG EKRFLTYYLV CVAGAGVCQL LVSWLMSSGT 
PVLGASGGVF GLLMAYGMLF PNERILLVFP PIPMKARTFV ILYGVIELLM GITGIQPNVA 
HFTHLGGMLF GWLLIRYWRG QPPFGGSGRK PKPPYIRMVP