Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1651 |
Symbol | |
ID | 6121610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1726436 |
End bp | 1727311 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641649635 |
Product | geranyltranstransferase |
Protein accession | YP_001776189 |
Protein GI | 170730756 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAAG CGCTGTTCAC GCGCTGGTGC CAACGCACCG ACAGCTACTT AGAACGAACG TTATCCATCC CCACCCAAGC GCCACAGCGG CTCCACGCCG CGATGCGATA CACCGTACTG AGTGGCGGCA AACGCATCCG TCCCTTACTG GTTTACGCTG CCGGCCACCT GTTTCATGTC GATGAACCCC TACTCGACGT ACCGGCTGCG GCCGTGGAAC TGATCCATGC CTATTCCCTG GTGCATGATG ACCTTCCCGC CATGGATGAC GACCTCTTAC GCCGAGGGCG TCCCACCGTC CATATCGCCT TCGACGAAGC CACTGCAATC CTCACTGGCG ACGCCTTGCA GACCCTGGCG TTTGAATGCT TAGCCGATGC CCCAGCCGAC GCCTCCCTGC GTATCGCCTG GTTACAGACA TTGACACACG CCGCAGGAGT TGCCGGCATG TGTGGCGGCC AGGCACTAGA TATTGACGCC ACTGGCCAAT CCCAGACACT CAAAGCACTG GAAGCCATGC ATGCGTTGAA GAGCGGCACA TTGATGCGAG CCGCCGTGAG AATGGGTGCC CTGGCTGGCG ACCCTTCCCC GGAGGATCTG CACTCCCTGG ACACCTTTGC GGCCACCCTT GGATTAGCAT TCCAAGTGCG TGACGACATC CTGGATATCG AGTCTAGTTC CGAACAACTT GGTAAAACGA CTGGCAAAGA TGCCATACAG CAGAAATCCA CCTTCCCCGC CCTCCTGAGC GTAGAAGGTG CCAAATGCTA TTTACAAGAA TTGGCAGAAC GCCTGTACAC CCAATTGCAT CCTTACGGCG AACGTGCTGC CCCCCTGACC GCACTGGCAC GCTTGGCTGT AGAACGTGCT CACTGA
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Protein sequence | MSKALFTRWC QRTDSYLERT LSIPTQAPQR LHAAMRYTVL SGGKRIRPLL VYAAGHLFHV DEPLLDVPAA AVELIHAYSL VHDDLPAMDD DLLRRGRPTV HIAFDEATAI LTGDALQTLA FECLADAPAD ASLRIAWLQT LTHAAGVAGM CGGQALDIDA TGQSQTLKAL EAMHALKSGT LMRAAVRMGA LAGDPSPEDL HSLDTFAATL GLAFQVRDDI LDIESSSEQL GKTTGKDAIQ QKSTFPALLS VEGAKCYLQE LAERLYTQLH PYGERAAPLT ALARLAVERA H
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