| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1641 |
|---|
| Symbol | |
|---|
| ID | 6119470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1712470 |
|---|
| End bp | 1713522 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649626 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001776180 |
|---|
| Protein GI | 170730747 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.667934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTGG TGTTGATCGT TTTACTGGGA CTCATTGCAC GGCCTGATTT AAAGCATTAT
GTGCCAGGCT GGAAGTATTA CGAGCATTAT CAGCATTTTG CGCATACCCC GCTCAATGCG
AGCGCGTCTA GTGTGGAGAT TGCACGTGGT GATTCTCTGC ATACGGTCTT GCTTAAATTA
CGTAAGGCTG GGGTTCAAAG CGGTAGTGAC TTGGAGTGGC AACTATTGGC ATATCAGGTA
GGTGCTGCCG GTAATTTGAA GTTCGGCGAT TACGCATTGG CGCCTGCGGT TTCTCCACAT
GATTTGCTAC AGCGTATGCG TCATGGCAAG GGTGAGCATT ACCGCTTCAC TATCGTTGAG
GGTTGGAACA TTCGTCAGCT GCGTGCTGCG TTGCGCCAAG CTACTCCTTT GGTGCATCGT
GCAGGCATGC TGGATGATGC GACATTAATG GCTCAATTGG GTTTCCCGGG TGAACATCCG
GAAGGGCGTT TTTTGCCTGA GACCTATTTG TACCAACGTG GAGACAGCGA CTTGGACGTT
TTGCGTCGTG CCCATGCAGC GATGCAAAAG GCGCTTGCCG AGACGTGGGC GGCGCGTGAT
CCGGCACTGA AGTTGCATAC TCCTGATGAG GCGCTGATTC TTGCTTCGAT TGTGGAGAAA
GAAAGTGGCT TGTCTACCGA GCGGCCGAAG ATTGCTGGAG TGTTTCTGCA CCGCATTGCG
CGAGGGATGC GATTACAGGC AGATTCGACG GTGATCTATG GGCTGGGCAG CATCTACGAC
GGTAATATCC GCAAGCGTGA TTTAAAGACC CCCACCCCCT ATAACACTTA CGTCCACACC
GGATTGACGC CGACTCCAAT TTCAATGCCT GGCCAGGATG CATTGCGTGC TGTGACGCGT
CCTGCAGTGG GCGACGCGCT GTATTTTGTT GCCCTTGGCG ATGGGAGTGG CGGACATACG
TTTTCCTCAT CACTGCAGCA GCATAACGCG GCGGTGGCGC GTTACTTGCA ACGCCTTCGT
GAACGCGAAA GCAAAACGAA GGAGCGGCAA TGA
|
|---|
| Protein sequence | MMLVLIVLLG LIARPDLKHY VPGWKYYEHY QHFAHTPLNA SASSVEIARG DSLHTVLLKL
RKAGVQSGSD LEWQLLAYQV GAAGNLKFGD YALAPAVSPH DLLQRMRHGK GEHYRFTIVE
GWNIRQLRAA LRQATPLVHR AGMLDDATLM AQLGFPGEHP EGRFLPETYL YQRGDSDLDV
LRRAHAAMQK ALAETWAARD PALKLHTPDE ALILASIVEK ESGLSTERPK IAGVFLHRIA
RGMRLQADST VIYGLGSIYD GNIRKRDLKT PTPYNTYVHT GLTPTPISMP GQDALRAVTR
PAVGDALYFV ALGDGSGGHT FSSSLQQHNA AVARYLQRLR ERESKTKERQ
|
|---|
| |