Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1616 |
Symbol | |
ID | 6119444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1690554 |
End bp | 1691786 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649600 |
Product | putative aminotransferase |
Protein accession | YP_001776155 |
Protein GI | 170730722 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00117595 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGGT CCATGGGGCG GTACTCGGAT GCACATTCAG TAGACTTTGC GTTCTTTTAT GTTCTGACGA GAGATAAGTC CTTCATGCAG GTCACGAGTA AGTTACCCCA AGTGGGGAGC ACGATATTTA GTGTGATGTC GCAGTTGGCG GATGTGTATG GGGCGGTCAA TTTAGGGCAG GGGTTCCCGG ATTTTCCGGT GCCGTTGCGT TTGCAGGAGG CGTTGGCGGG TGCGGTGCGT GAGGGACACA ATCAGTATCC GCCGATGATT GGGGTGGCTG GGTTGCGTCA GGGAATCGCT GCGAAGGTGT TGCGCTGTTA CGGTGCGCAG GTGGATGTGG ATGTTGAGAT CACGGTGACC AGTGGGGCGA CGGAGGCGAT TTTTAATGCA ATCCATGCGG TGGTGGGGGC GGGTGATGAG GTCATTGTGC TTGATCCAGC GTATGACTGT TATGAGCCGG GGATTGTGTT GGCCGGTGCG CGTGCGGTGC ATGTGCCATT GGATGCGGTG AGTTTTACGG TGGATTGGGA GCGGGTGGGT GCGGCGATCA CGTCAAGAAC GCGGTTGTTG ATCGTGAATA GTCCGCATAA TCCGTCCGGG GCGTTGTTTT CAGCCGATGA TATGCGGGCT TTAGCGGCGT TGTTGGATGG GACGGATATT TTGCTGATTT CCGATGAGGT GTATGAGCAT ATTGTGTTTG ATGGGTGTGG CCATGAGTCG GTGTTGCGTT GGCCGCAGTT GCGTGCGCGT GCGTTTGTGA TTTCTAGTTT CGGTAAAACC TATCATTGCA CCGGATGGAA AATTGGTTAT GCGATTGCGC CGCCGGCGCT TAGTGCGGAG TTTCGTAAGG TCCATCAATA CAACACGTTT ACTAGTTTTG GACCGGCGCA ATATGCATTT GCTGCGATGT TGCGGGAGGA GCCTGAATAT GTGGAGCAGG TGGGTTTGTT CTATCAGGCA AGACGCGATT GTTTCCGTGA GCAGTTGTTG ACAACCAAGT TAGTGCCGCT GCCTGTGTCG GGAGGTTATT TTCAGTTGGT GGATTATGGG GCGGTCAGTG ATTTGTCTGA TGTGGAGTTT TCAAGGTGGT TAGCGGTGGA AAAGGGGGTG GTGTCGATTC CGTTATCGCC GTTCTATGAG ACTGCTCCAG CGGGGCAGCG TTTGGTGCGG TTGTGTTTCG CTAAAAATGA TATGACGTTG GGGGCGGCGA TCGAGCGGTT ACAACGGCTT TGA
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Protein sequence | MLRSMGRYSD AHSVDFAFFY VLTRDKSFMQ VTSKLPQVGS TIFSVMSQLA DVYGAVNLGQ GFPDFPVPLR LQEALAGAVR EGHNQYPPMI GVAGLRQGIA AKVLRCYGAQ VDVDVEITVT SGATEAIFNA IHAVVGAGDE VIVLDPAYDC YEPGIVLAGA RAVHVPLDAV SFTVDWERVG AAITSRTRLL IVNSPHNPSG ALFSADDMRA LAALLDGTDI LLISDEVYEH IVFDGCGHES VLRWPQLRAR AFVISSFGKT YHCTGWKIGY AIAPPALSAE FRKVHQYNTF TSFGPAQYAF AAMLREEPEY VEQVGLFYQA RRDCFREQLL TTKLVPLPVS GGYFQLVDYG AVSDLSDVEF SRWLAVEKGV VSIPLSPFYE TAPAGQRLVR LCFAKNDMTL GAAIERLQRL
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