Gene Xfasm12_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1616 
Symbol 
ID6119444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1690554 
End bp1691786 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content54% 
IMG OID641649600 
Productputative aminotransferase 
Protein accessionYP_001776155 
Protein GI170730722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00117595 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGGT CCATGGGGCG GTACTCGGAT GCACATTCAG TAGACTTTGC GTTCTTTTAT 
GTTCTGACGA GAGATAAGTC CTTCATGCAG GTCACGAGTA AGTTACCCCA AGTGGGGAGC
ACGATATTTA GTGTGATGTC GCAGTTGGCG GATGTGTATG GGGCGGTCAA TTTAGGGCAG
GGGTTCCCGG ATTTTCCGGT GCCGTTGCGT TTGCAGGAGG CGTTGGCGGG TGCGGTGCGT
GAGGGACACA ATCAGTATCC GCCGATGATT GGGGTGGCTG GGTTGCGTCA GGGAATCGCT
GCGAAGGTGT TGCGCTGTTA CGGTGCGCAG GTGGATGTGG ATGTTGAGAT CACGGTGACC
AGTGGGGCGA CGGAGGCGAT TTTTAATGCA ATCCATGCGG TGGTGGGGGC GGGTGATGAG
GTCATTGTGC TTGATCCAGC GTATGACTGT TATGAGCCGG GGATTGTGTT GGCCGGTGCG
CGTGCGGTGC ATGTGCCATT GGATGCGGTG AGTTTTACGG TGGATTGGGA GCGGGTGGGT
GCGGCGATCA CGTCAAGAAC GCGGTTGTTG ATCGTGAATA GTCCGCATAA TCCGTCCGGG
GCGTTGTTTT CAGCCGATGA TATGCGGGCT TTAGCGGCGT TGTTGGATGG GACGGATATT
TTGCTGATTT CCGATGAGGT GTATGAGCAT ATTGTGTTTG ATGGGTGTGG CCATGAGTCG
GTGTTGCGTT GGCCGCAGTT GCGTGCGCGT GCGTTTGTGA TTTCTAGTTT CGGTAAAACC
TATCATTGCA CCGGATGGAA AATTGGTTAT GCGATTGCGC CGCCGGCGCT TAGTGCGGAG
TTTCGTAAGG TCCATCAATA CAACACGTTT ACTAGTTTTG GACCGGCGCA ATATGCATTT
GCTGCGATGT TGCGGGAGGA GCCTGAATAT GTGGAGCAGG TGGGTTTGTT CTATCAGGCA
AGACGCGATT GTTTCCGTGA GCAGTTGTTG ACAACCAAGT TAGTGCCGCT GCCTGTGTCG
GGAGGTTATT TTCAGTTGGT GGATTATGGG GCGGTCAGTG ATTTGTCTGA TGTGGAGTTT
TCAAGGTGGT TAGCGGTGGA AAAGGGGGTG GTGTCGATTC CGTTATCGCC GTTCTATGAG
ACTGCTCCAG CGGGGCAGCG TTTGGTGCGG TTGTGTTTCG CTAAAAATGA TATGACGTTG
GGGGCGGCGA TCGAGCGGTT ACAACGGCTT TGA
 
Protein sequence
MLRSMGRYSD AHSVDFAFFY VLTRDKSFMQ VTSKLPQVGS TIFSVMSQLA DVYGAVNLGQ 
GFPDFPVPLR LQEALAGAVR EGHNQYPPMI GVAGLRQGIA AKVLRCYGAQ VDVDVEITVT
SGATEAIFNA IHAVVGAGDE VIVLDPAYDC YEPGIVLAGA RAVHVPLDAV SFTVDWERVG
AAITSRTRLL IVNSPHNPSG ALFSADDMRA LAALLDGTDI LLISDEVYEH IVFDGCGHES
VLRWPQLRAR AFVISSFGKT YHCTGWKIGY AIAPPALSAE FRKVHQYNTF TSFGPAQYAF
AAMLREEPEY VEQVGLFYQA RRDCFREQLL TTKLVPLPVS GGYFQLVDYG AVSDLSDVEF
SRWLAVEKGV VSIPLSPFYE TAPAGQRLVR LCFAKNDMTL GAAIERLQRL