| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1594 |
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| Symbol | |
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| ID | 6119422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1667143 |
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| End bp | 1668321 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649578 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001776133 |
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| Protein GI | 170730700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.632242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCC TGGATGAATG GTTCTGGTTT TTCTTATTTC TGCCTCTGGC TGCTTTGAGC
GGCTGGGTCA TTGGCCGACG GGGAGGGCAA CGACATGGGC ATGCCCAGGT TAGCCGATTG
TCCAGTACTT ATTTTCGCGG ACTGAATTAC TTACTCAGTG AACAACCCGA TAAAGCAATC
GAGTTGTTTC AGCATATTGC GGAGCTGGAT AAGGAAACGT TTGAGACACA AGTTGCGCTT
GGTCATTTGT TCCGCCGTCG CGGCGAGATT GATCGTGCGA TCCGATTGCA TCAAGGATTG
TTTAAGCGGC CTGATTTGAC CGACCATCAA AAGGTGTTTG CCTTACTTGC GTTGGGCGAG
GATTACATGA AGTCTGGATT GCTGGATCGT GCAGAGACAG TCTTCACAGA ACTTGCGCAG
ATTGATCAAC GTGCACCGCA AGCGCTACGC CACTTAATCA GCATCTACCA AGCGGAGCGT
GATTGGGAGA AAGCGATCGA TAATGCGATT CGCTATGAAG TGGCGACTGG AGAGCCGATG
GGCAAGCTTA TTGCTCAATT TGAATGCGAG TTGGCAGATC GTTACCGTGC TTCCAACCAG
CATGATAGGG CGCTGGAAGC GGTCAGCCGT GCTTACCAAG CCGATGCGAC TTCGGTACGT
GCCGGTATCA TTGAAGGTCG CATTGAGGCT GATTTGGGTC ATCATGAGGC TGCGGTCCGC
GCTTGGGAGC GTGCTGCGCG CCATGATCCC GAATATCTTC CGGAGATCAT TCCGGCGTTG
CTGATTGCCT ATCGTCAAGT GGGTGATATT GCTGGGGCCC GTAATTTCCT TTCCGAGATG
ACAGAGCACT ATCGTGGTAT TGCACCCGTT TTGGCAATGA CCCAACTGAT TGAATCGCAG
GAAGGATCAG CACAAGCGCG TGGTTATCTT GGTAGCCAGC TCAAAGCGAA GCCCTCGGTA
CGTGGTCAAT CGGCGTTGAT TGATCTGACT CTGGCTGACG GAAGTGATCC GGTCGCGTCT
TTGTATGATC TAAAGCATAT TACCGATCAA CTGTTGGTAC GCAATCCGAG TTACCGTTGT
ACGCGTTGTG GTTTTGGCGC TAAGACGCAT CATTGGCAAT GTCCAAGTTG TAAAGAGTGG
GGAACAGTCA AACCATTGCT GAACTATGCG GTGGTCTAA
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| Protein sequence | MEFLDEWFWF FLFLPLAALS GWVIGRRGGQ RHGHAQVSRL SSTYFRGLNY LLSEQPDKAI
ELFQHIAELD KETFETQVAL GHLFRRRGEI DRAIRLHQGL FKRPDLTDHQ KVFALLALGE
DYMKSGLLDR AETVFTELAQ IDQRAPQALR HLISIYQAER DWEKAIDNAI RYEVATGEPM
GKLIAQFECE LADRYRASNQ HDRALEAVSR AYQADATSVR AGIIEGRIEA DLGHHEAAVR
AWERAARHDP EYLPEIIPAL LIAYRQVGDI AGARNFLSEM TEHYRGIAPV LAMTQLIESQ
EGSAQARGYL GSQLKAKPSV RGQSALIDLT LADGSDPVAS LYDLKHITDQ LLVRNPSYRC
TRCGFGAKTH HWQCPSCKEW GTVKPLLNYA VV
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