Gene Xfasm12_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1581 
SymbolrpsT 
ID6119409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1652029 
End bp1652358 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content49% 
IMG OID641649566 
Product30S ribosomal protein S20 
Protein accessionYP_001776121 
Protein GI170730688 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TAATCATCGG CCTAATTTTT CATCAATGGA TTTCTGAGGA AAGCATTTCT 
GTGGCCAATA TCAAGTCCGC CAAAAAGCGC GTTAAGCAGA CCGTTGTGCG TAATGAACGG
AACACGGCGC AGCGTTCGAT GTTGCGCACT GCCGTCAAAA AAGTAATTAA GGCTCTCAGC
ATCAAAGATA TCGCTGGTGC CGAGACCGCT TTCGCTGTTG CCCAACCAAT CCTTGACCGT
TTCAGCTCCC GTGGGTTGAT TCATAAGAAT AAGGCGGCCC GCCATAAGAG TCGGTTGACG
GCCCGTATCA AAGCGCTGAA AACTGCCTGA
 
Protein sequence
MKIIIIGLIF HQWISEESIS VANIKSAKKR VKQTVVRNER NTAQRSMLRT AVKKVIKALS 
IKDIAGAETA FAVAQPILDR FSSRGLIHKN KAARHKSRLT ARIKALKTA