Gene Xfasm12_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1578 
SymbolileS 
ID6119406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1646442 
End bp1649273 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content59% 
IMG OID641649563 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001776118 
Protein GI170730685 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAAG ACTACAAAAC CACCCTGCAT CTGCCCGCGA CCGACTTCCC CATGCGTGGC 
GACCTCCCCA AACGTGAACC GGCCATCCTC GAGCGTTGGG AACGTGACGA CTTCTACGCA
CAACTGCGCG CCCATGCCAA AGGCCGCCCC CTGTTCCTCC TCCACGACGG CCCACCCTAC
GCCAATGGCC AGATCCACCT TGGCCATGCC GTCAACAAAA TCCTCAAAGA CATCATCATC
AAATCCAAAC ACCTAGACGG CTTTGACGCA CCCTACATCC CAGGCTGGGA TTGCCACGGC
TTGCCGATTG AAATTGCCAT TGAAAAAAAA TACGGCAAAG TCGGCGTTAC CTTGGATGCC
GTCCAATTCC GCCAAAAATG CCGTGAATAC GCTGCCGAAC AGATCCAATT GCAGCGTCGC
GACTTCAAAC GCCTCGGCGT CATCGGTGAC TGGGACGCCC CCTACAAAAC CCTTGATTTC
CGCTTTGAAG CCGACGAAAT CCGCGCCCTT GCCAAAATCG TTGACAAAGG CCACTTAATC
CGTGGTACCA AACCAGTGCA TTGGTGCTTT GATTGTGGCT CAGCACTGGC TGAAGCAGAG
ATCGAATACA CCGACAAAAC CTCCCCAATG GTGGACGTTG CCTATCCTGC CCTGGACCCC
AGCGCCCTGG CAGCCGTATT CAACGCCACA CTCCCCCCTG ATGTACAACT TGCCGTCCCC
ATTTGGACCA CCACCCCGTG GACACTCCCC GCCTCCCTGG CTATCTCTGT TGGACCAACC
CTGGACTACG TCCTGGTTGA AGGACCGACC CACTCTGGCC AGCGCCGCTG GCTCATCCTG
GCCGAAGCAC TTGCCGCCAA AGCACTGGCA CGCTACGGCA TCGCCGAACT GCTCATCCAT
GGCAGCGCCA AAGGAGCCGC CATGGAGCAG CACATCTTGG CCCACCCGTT TTATCCCGAT
CGCACCATCC CCCTACTGCT TGGCAACCAC GTTTCCGCCG AAGACGGCAC CGGTGCCGTC
CACACCGCCC CTGGCCACGG CCAAGAAGAC CACCAGGTCT TTCAACAATA CGGATTACTC
AATCGCTACA GCGCTGCCGA ACTCAACCCC GTCGACGCCC GCGGCGTCTA CCTGTCGACA
ACCCCACCAT TAGGTGAACT AACACTGGCC GGCCTGCATA TCTGGAAAGC CAACCCACTG
ATTGTCGACG CCTTACGCCT CCGTGGCGTC CTCCTTGCCG CCGCTGAAAT GCATCATAGC
TACCCCCATT GCTGGCGCCA CAAAACCCCC ATTGTCTTTC GCGCCACCCC CCAGTGGTTC
ATCTCTATGG AACAAGCGGC CCTGCGCTCA GCCGCCCTCA AGGCCATCAC ACACGTCACC
TGGTATCCCC AGTGGGGCCA AGCCCGCATC CTCAGCATGA TAGAAAACCG CCCAGACTGG
ACCATCTCCA GACAACGCAC CTGGGGCGTC CCGATTCCCC TGTTTGTACA CCGTCACAGC
GGAGCACCCC ATCCACGCAG CGCCGCATTG ATGCGCCAAA TTGCCGACCG CGTCGAACAA
CAGGGCGTTG ACATCTGGTA CTCCCTGGAC CAAACCGAAT TACTCGGCAC TGAAGCCGAT
CAATACGAAA AAATCACCGA TATCCTTGAC GTCTGGTTTG ATTCCGGCAT CACCCATGAA
GCAGTGCTCC TTGAGCGCGG CCTCCCTAAA CCCGCTGACC TCTACCTCGA AGGTGCCGAC
CAACACCGCG GCTGGTTCCA ATCCTCCCTC CTCACCGGCG TCGCCATGGA CAACGCCGCA
CCCTACAAAC AATGCCTGAC CCACGGCTTC ACCGTCGACC AACACGGCCG AAAAATGTCC
AAATCACTGG GTAATGGAAT CGAACCCCAG GACATCATCA AGACATTGGG CGCCGACATC
CTGCGTTTGT GGATTGCCTC CACCGACTAC AGCAACGAAA TGTCCCTCTC CCAAGAGATT
CTCAAGCGCA CCACAGATGC CTACCGCCGC ATCCGCAACA CCACCCGCTT CCTCCTCGGC
AACCTGCATG GCTTTGATCC CACCCTACAC CTCGTGCCCC TGAGCGACAT GATCGCCCTG
GATCGCTGGA TTGTTCACCG CGCCTTTGAA CTCCAACAGA CCATCAAAGC CGCCTACACC
CGCTACGACT TTGCCGAAAT CATCCAAAAA ATATTGAACT TCTGCAGCGT CGACCTCGGC
TCACTCTACC TCGACGTCAC CAAAGATCGT CTCTACACAA TGCATGAAAA CGCCCCCGGC
CGACGTTCCG CACAGACCGC CATGTACCAT CTCACCGCCG CCTTTGTCCG ATGGATCGCC
CCCATACTCA GCTTCACCGC TGACGAACTA TGGTCCTACT TACCCGGTGA CCACGCCGAC
AACGTCCTCT TTACCACCTG GTACGACGGC CTCGCCCCCT TACCACCCAA CGCCCCCCTG
ACCGCTGCCG ACTTCGACAA ACTCCTCACC TTGCGTGACC ACGTCACCAA AGTACTGGAA
CCCATGCGCG CCAACGGCGT TATTGGCGCC GCATTAGAAG CAGAAATCAC CGTCGCTGCT
GATGCCGACA CCGCCGCCCG CTGGCAACCA CTCACCGAAG AACTCCGCTT CCTCTTTATC
ACTGGAGATG TCACCGTCAC CCCGGCCAAC ACCGATGGCT TCTTTGTCAG CGCCCAAGCA
ACCACCAAAG CCAAATGTGC CCGCTGCTGG CATTACCGTG CCGACATAGG CGCTCACCCA
ACCCATCCCG AACTCTGCGG ACGCTGCATC ACCAACGTTG ACGGACCAGG AGAACAGCGC
CATTGGTTCT GA
 
Protein sequence
MSQDYKTTLH LPATDFPMRG DLPKREPAIL ERWERDDFYA QLRAHAKGRP LFLLHDGPPY 
ANGQIHLGHA VNKILKDIII KSKHLDGFDA PYIPGWDCHG LPIEIAIEKK YGKVGVTLDA
VQFRQKCREY AAEQIQLQRR DFKRLGVIGD WDAPYKTLDF RFEADEIRAL AKIVDKGHLI
RGTKPVHWCF DCGSALAEAE IEYTDKTSPM VDVAYPALDP SALAAVFNAT LPPDVQLAVP
IWTTTPWTLP ASLAISVGPT LDYVLVEGPT HSGQRRWLIL AEALAAKALA RYGIAELLIH
GSAKGAAMEQ HILAHPFYPD RTIPLLLGNH VSAEDGTGAV HTAPGHGQED HQVFQQYGLL
NRYSAAELNP VDARGVYLST TPPLGELTLA GLHIWKANPL IVDALRLRGV LLAAAEMHHS
YPHCWRHKTP IVFRATPQWF ISMEQAALRS AALKAITHVT WYPQWGQARI LSMIENRPDW
TISRQRTWGV PIPLFVHRHS GAPHPRSAAL MRQIADRVEQ QGVDIWYSLD QTELLGTEAD
QYEKITDILD VWFDSGITHE AVLLERGLPK PADLYLEGAD QHRGWFQSSL LTGVAMDNAA
PYKQCLTHGF TVDQHGRKMS KSLGNGIEPQ DIIKTLGADI LRLWIASTDY SNEMSLSQEI
LKRTTDAYRR IRNTTRFLLG NLHGFDPTLH LVPLSDMIAL DRWIVHRAFE LQQTIKAAYT
RYDFAEIIQK ILNFCSVDLG SLYLDVTKDR LYTMHENAPG RRSAQTAMYH LTAAFVRWIA
PILSFTADEL WSYLPGDHAD NVLFTTWYDG LAPLPPNAPL TAADFDKLLT LRDHVTKVLE
PMRANGVIGA ALEAEITVAA DADTAARWQP LTEELRFLFI TGDVTVTPAN TDGFFVSAQA
TTKAKCARCW HYRADIGAHP THPELCGRCI TNVDGPGEQR HWF