| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1566 |
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| Symbol | |
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| ID | 6120007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1634436 |
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| End bp | 1636598 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649551 |
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| Product | toxin secretion ABC transporter ATP-binding protein |
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| Protein accession | YP_001776107 |
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| Protein GI | 170730674 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.206767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATACA AAAATCCCCT TGCAACGCAA CAGAATCAAC GCGCTTCCAA TCCACAGCCT
GACAGCTCAC TCCACGGCTT AGTCCTCCTT GCCCAATTCC ATGGCATTGC GGCTGACCCC
GTACAGATAG CGCATGACTT CGGGCGCAGT GGCGAACCAT TCGATGAAAC AACCTTGCTA
CTGGCCGCCA AAAAACTCGG ACTAAAAGCC AAAGTCGTCA CCCAACCGGT CACCCGTATC
GCAATGGCCG CATTACCTGC ACTCGCACTG ATCCCTGGAG GAACGGCATT TATCGTCGCC
AAAGTGACAG GCAACCAGAT ACTGATCCAC GACCTGGCAG ATCAACGACC ACGCACAATC
TCACACGATG AATTTACCGC ACGCTACGCC GGCCGCTTAC TCCAAGTCGC CTCCCGCGCA
TCGGTCCTAG GAAATCTGGC TAAATTCGAC TTTAGCTGGT TCATCCCCGC AGTGGTCAAA
TATCGCAAAC TGCTGGCTGA AGTCTTTGCA GTGTCATTAT TTATCCAGAT ATTCGCACTG
GTGACACCCC TGTTCTACCA AGTCGTGATG GACAAAGTTC TCGTACACCA AGCACTCAGC
ACCCTTGAAG TCATTGTAGT TGGCCTAATC TCCCTGGCCT TATTCGAAGT AGTACTCACC
GCACTACGCA CCCATGTCTT CGCACATACC ACCAGCAAAA TTGATGTTGA ACTGGGCGCT
CGCTTATTCC GCCATCTATT AGCACTCCCC TTAGCGTATT TTGAATCGCG CAGGGTTGGC
GACACCATCG CCCGCGTACG CGAACTAGAA AACATCCGCC ACTTCCTCAC CGGCCAAGCA
CTGACCTCCG TCTTAGACCT CCTATTCACC GTCGTCTTTT TGTCCGTCAT GTTTTGGTAC
AGCAGCTGGC TCACCCTGAT TGTGGTGATC TCATTACCCA TATACGTACT GATCTCCGCA
TTCATCACCC CAGTACTCCG CAAACGTCTG GATGAAAAAT TTGCACGCGG CGCAGACAAC
CAAGCATTTT TAGTGGAAAC CGTCAGCGGC ATTGGCACCG TTAAAGCAAT GGCCGTAGAC
CCACGTGTCA CCCGCACCTG GGACAACCAA CTGGCGGGAT ACGTTAGCGC CAGCTTTAGC
GTTACCAAAA TTGCCACCCT CGGCCAACAG AGCGTTCAAT TAGTACAGAA ACTGACCAAC
GTTGCCGTAT TATTTTGGGG CGCCAAACTG GTAATTGACG GACAACTGTC CCTCGGACAA
CTAATTGCCT TCAACATGTT GTCCGGCCAA GTCACTGCCC CCATCATCCG GCTCGCCCAG
CTATGGCAGG ATTTTCAACA AGTCGGACTC TCCGTCGAAC GACTCGGCGA AATTCTGAAC
ACCCGTACCG AACTCCCCGG CAGCCGCATG ACATTGCCGC CCATCCAAGG GCGCATCACC
TTCGAACGCC TCATCTTCCG CTACCGTCCA GATACCCCCG ACGTGCTCTC CGGAATCGAC
CTAGACATTC AACCTGGCGA AGTCATCGGC ATCGTAGGAC GCTCCGGCTC TGGGAAAAGC
ACCCTGACAA AACTCGTACA GCGCATGTAC GTCCCGGAAC GCGGCCGCGT CTTGGTCGAC
AGCCACGACC TCTCATTGGC CGATCCCGCC TGGCTGCGTC GCCAAATTGG CGTCGTACTG
CAAGAAAATT TCCTGTTCAA CCGCAGCGTC CGTGAAAACA TCGCCATGGC CGACCCGGGA
ATCCCCCTGG AACGCGTCAT CCACGCAGCG ACATTAGCCG GTGCCCATCC CTTCATTGCT
GAACTACCAG AAGGCTATGA CACCAAGATT GGTGAACACG GTACAGGACT CTCCGGCGGC
CAACGCCAAC GCATCGCCAT TGCCCGCGCC CTGATTGGCG ACCCACGTAT CCTTATTTTC
GATGAAGCCA CCAGCGCACT CGACTACGAA TCAGAACATG CCGTCATGCA AAACATGCGA
GCCATTTGCA AAGGCCGCAC CGTTCTCATC ATCGCCCACC GCCTCTCCAC AGTCCGTAAT
GCCGATCGTA TCGTCGTCAT TGATAAAGGA AAAATCGTAG AAAGCGGCTC CCACGAAACA
CTCCTCAACC GCAACAACGG TCATTACGCC CACCTCTACC GACTCCAACA AGGGACCACA
TGA
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| Protein sequence | MTYKNPLATQ QNQRASNPQP DSSLHGLVLL AQFHGIAADP VQIAHDFGRS GEPFDETTLL
LAAKKLGLKA KVVTQPVTRI AMAALPALAL IPGGTAFIVA KVTGNQILIH DLADQRPRTI
SHDEFTARYA GRLLQVASRA SVLGNLAKFD FSWFIPAVVK YRKLLAEVFA VSLFIQIFAL
VTPLFYQVVM DKVLVHQALS TLEVIVVGLI SLALFEVVLT ALRTHVFAHT TSKIDVELGA
RLFRHLLALP LAYFESRRVG DTIARVRELE NIRHFLTGQA LTSVLDLLFT VVFLSVMFWY
SSWLTLIVVI SLPIYVLISA FITPVLRKRL DEKFARGADN QAFLVETVSG IGTVKAMAVD
PRVTRTWDNQ LAGYVSASFS VTKIATLGQQ SVQLVQKLTN VAVLFWGAKL VIDGQLSLGQ
LIAFNMLSGQ VTAPIIRLAQ LWQDFQQVGL SVERLGEILN TRTELPGSRM TLPPIQGRIT
FERLIFRYRP DTPDVLSGID LDIQPGEVIG IVGRSGSGKS TLTKLVQRMY VPERGRVLVD
SHDLSLADPA WLRRQIGVVL QENFLFNRSV RENIAMADPG IPLERVIHAA TLAGAHPFIA
ELPEGYDTKI GEHGTGLSGG QRQRIAIARA LIGDPRILIF DEATSALDYE SEHAVMQNMR
AICKGRTVLI IAHRLSTVRN ADRIVVIDKG KIVESGSHET LLNRNNGHYA HLYRLQQGTT
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