Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1531 |
Symbol | |
ID | 6119972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1595418 |
End bp | 1596950 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641649519 |
Product | GumJ protein |
Protein accession | YP_001776075 |
Protein GI | 170730642 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.107996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACG GTGTGGTGAG TGTATCTACG GTGTCCGAGC GTAGTTTGGC TTCACGTGCG GTTGGCGGTG CCGTGGTGAC GATGCTTGGG CAGGGGGCGA GGGTAGTTAT CCAATTTTCT ATTATCGTGC TATTGGCGCG GTTGTTGAAT CCGCATGATT ATGGTCTGAT GGCGATGGTC ACTGCGATTG TGGGTGTTGC TGATATTCTT CGTGATTTTG GCCTTTCTTC GGCGGCGATC CAGGCAAAGC AGATTACAAA CGCGCAGCGC GATAATCTAT TCTGGATTAA TAGTGCGATC GGATTGGCAC TGTCTTTGGT GGTATTCGTT GCGGCACAGG TAATTGCTGA TTTTTATCGT GAACCTGCAT TAGTGACGAT TACGCAGGTA TTGGCGATTA ATTTTTTACT TAATGGGATG GCAACTCAGT ATCGCGCCAA TCTTAGCCGT GAGATGCGTT TCGGTCAGCT TGCATTGAGT GATATTGGTG CGCAGGTGTT AGGTCTGTTA GTTGGTGTTG GTGTGGCGCT AGTCGGATGG GGCGTTTGGG CGTTGGTGTT GCAGCAGGTG GTGCAAGCTG TGGCGAATCT GGTAATTGCA ATGGTCTGTG CGCGTTGGCT GCCAGGTGGT TATCGCCGTG GTGTGCCGAT GGGAAGTTTT CTCAGTTTTG GTTGGAATCT GATGGTTGCG CAATTGCTAA GCTATGCCAA TCGCAGTGTT GGTCAAGTGA TTATCGGTTA TCGGCTTGGT CCTAATGTAC TTGGTTTGTA TAACCGTGCA TTCCAGTTGT TGATGATGCC ATTGAATCAG GTGATTGCGC CGGCAAGTTC AGTGGCGTTG CCGGTGCTTT CTCAGTTGCA AGATGATCGT GCTCGTTTCG ATAGCTTTTT ATTGCGTGGG CAAACGATGA TGTTGCATGT GATTGTTCCG TTGTTTGCAT TTGCTTGTGC GCAGGCCACT CCATTAATTG TATTGGTCCT TGGTGAAAAG TGGCGTTCTG CGGTGTTGTT ATTTCAAATT TTGACATTGG CTGGTATGAC GCAGAGTGCT AGTTATGCAA GTTATTGGCT ATTTTTAGCA CGTGGTTTGA TACGCGATCA TCTTTTATTT TCTATTGTCA GTCATGTGTT TTTGGTGTTG TGTGTGTGCA TTGGTGCTTA TTGGGGTGTA TTTGGTGTGG CTATTGGTTA CAGCATTAGT TTAGCTTTGA TATGGCCATT GTCGATTATT TGGGCGGCGC GTATTACACC TGTTCCTGGT TGGGAAATGT TTTTCAATGG GATGCGTGCG ATCGTAGGTT ACGGGGTGTG TGCATTTGCT TCTATGTATG CTTCGCAGTG GTGTGACGAG TCGAATCTTT GGAAGCAATT GATAGTTGGT GCTTTGGCAA TGTTGGTAGT TTTTGCAGTG TTATCCTTGT TATGGCCAGC ATTTCGTCGT GATGTGCTGT CTATCATTAA GATCGGTATG TCTTCTTCAG CAGTATCTTC TTTTCTTCTA AGGATCATGA GGAGAGTGAG GAAGGGATCT TAA
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Protein sequence | MSDGVVSVST VSERSLASRA VGGAVVTMLG QGARVVIQFS IIVLLARLLN PHDYGLMAMV TAIVGVADIL RDFGLSSAAI QAKQITNAQR DNLFWINSAI GLALSLVVFV AAQVIADFYR EPALVTITQV LAINFLLNGM ATQYRANLSR EMRFGQLALS DIGAQVLGLL VGVGVALVGW GVWALVLQQV VQAVANLVIA MVCARWLPGG YRRGVPMGSF LSFGWNLMVA QLLSYANRSV GQVIIGYRLG PNVLGLYNRA FQLLMMPLNQ VIAPASSVAL PVLSQLQDDR ARFDSFLLRG QTMMLHVIVP LFAFACAQAT PLIVLVLGEK WRSAVLLFQI LTLAGMTQSA SYASYWLFLA RGLIRDHLLF SIVSHVFLVL CVCIGAYWGV FGVAIGYSIS LALIWPLSII WAARITPVPG WEMFFNGMRA IVGYGVCAFA SMYASQWCDE SNLWKQLIVG ALAMLVVFAV LSLLWPAFRR DVLSIIKIGM SSSAVSSFLL RIMRRVRKGS
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