Gene Xfasm12_1512 details

Gene Information

• Locus tag: Xfasm12_1512
• Symbol: dnaK
• ID: 6119953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 1576197
• End bp: 1578113
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641649501
• Product: molecular chaperone DnaK
• Protein accession: YP_001776057
• Protein GI: 170730624
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.758728
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAA TCATTGGTAT CGACCTCGGC ACCACAAATT CGTGCTTAGC GATTATTGAA 
GGCGGTAAAG GGCGTGTCAT CGAAAACTCG GAGGGTGATC GGACCACTCC TTCCATTGTT 
GCTTACACCA AGGATGGTGA AGTGCTTGTT GGTGCTGCAG CCAAGCGCCA AGCGGTCACA 
AATCCGAAAA ACACCTTTTA TGCGGTTAAG CGTTTGATTG GACGTAAGTT CGGTGATGCA 
GAGGTCCAAA AGGACCTTGA TTTGGTGCCG TATAAGATTA CTCAGCATGA CAATGGGGAT 
GCCTGGGTGG CCACTGCTGA TGGTAAGAAG CTGGCGCCGC AGGAAATCTC TGCCAAGGTG 
CTGGAGAAAA TGAAGAAGAC CGCCGAGGAT TTCCTGGGCG AGAAAGTCAC CGAAGCGGTG 
ATTACCGTGC CGGCATATTT TAATGACAGT CAGCGTCAGG CGACGAAAGA TGCTGGTCGG 
ATTGCTGGCC TGGATGTCAA ACGTATTATC AACGAGCCGA CTGCTGCGGC ATTGGCTTAC 
GGTTTGGACA AGAAGGGCGG AGATCGCAAG ATCGCTGTAT ATGATCTTGG CGGCGGTACC 
TTTGACGTCT CGATCATTGA AATTGCTGAA GTGGATGGTG AGAAGCAGTT CGAGGTATTG 
GCGACCAATG GTGATACCTT CTTGGGAGGT GAGGATTTCG ACAAGCGTGT TATTGATTAT 
CTGGTTGATG AATTCAATAA GGATCAGGGG ATTGATTTGC GCAAGGATCC GCTTGCGTTG 
CAACGTTTAA AGGATGCTGC TGAGCGCGCT AAAATCGAAT TGTCTTCTTC CCAGCAAACC 
GAAGTTAACC TGCCATACAT TACGGCGGAT GCATCGGGTC CGAAGCACCT GAATATCAAA 
CTGACTCGCG CCAAGCTTGA AGCCTTGGTA GACGACTTGG TCCGTAAGTC AATTGAGCCA 
TGCCGCATTG CGTTGAACGA CGCCGGGTTG CGTACCAGTG ATGTTCAAGA AGTGATTTTG 
GTTGGTGGCC AGACCCGTAT GCCGAAGGTC CAGCAAGCGG TTGCCGATTT CTTTGGTAAA 
GAGCCGCGTA AGGACGTTAA TCCGGACGAA GCAGTTGCAT TGGGTGCTGC AATTCAGGGT 
GGGGTGCTGG CTGGTGACGT GAAGGATGTG TTACTGCTAG ATGTGACCCC GTTATCCCTT 
GGTATTGAAA CGATGGGTGG TGTGTTTACC AAGATTATCG AGAAGAACAC GACCATTCCG 
ACCAAAGCGT CCCAGGTGTT TTCTACTGCC GAGGATGGTC AGTCCGCAGT GACTGTCCAT 
GTGTTGCAAG GTGAACGTGA GCAGGCGCGT TTCAATAAAT CGCTTGCTAA ATTCGATTTG 
GCGGGTATCG AACCTGCGCC GCGTGGCCAG CCGCAGATTG AGGTGTCTTT TGATATTGAT 
GCCAACGGTA TTTTGCATGT CTCTGCCAAG GACAAGAAAA CCAATAAGGA GCAGAAGGTC 
GAGGTTAAAG CTGGTTCTGG ACTTTCGGAT AGTGAGATTC AACAGATGGT TGCCGATGCT 
GAGGCACATC GTGAGGAAGA CAAAAAGTTC CAAGAGTTGG TGCAGGCAAG GAACCATGCT 
GACGGTTTGA TCCATTCAAC CCGTTCGGCC ATTAAGGAGC ATGGTAGTAA GGTTGGGGGT 
GAGCTGATTG GGCGTGTCGA AGCCTCCCTT GCAGAGCTTG AGGCTGCCGT CAAAGGTGAT 
GATAAAAACC AGATTGAGGC GAAATCCAAA ACTCTTGAGG AAGTTGCACA GTCGTTGCAC 
ATGGCAGCAA CAGCAGAGCA GCAGTCAGCA AGCACGGGGG CTGGTGCAGG CTCTTCAGCC 
AAGGTTGACG ATGTGGTTGA TGCTGAATTC ACAGAAGTCA AGGGCGACAA AAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCLAIIE GGKGRVIENS EGDRTTPSIV AYTKDGEVLV GAAAKRQAVT 
NPKNTFYAVK RLIGRKFGDA EVQKDLDLVP YKITQHDNGD AWVATADGKK LAPQEISAKV 
LEKMKKTAED FLGEKVTEAV ITVPAYFNDS QRQATKDAGR IAGLDVKRII NEPTAAALAY 
GLDKKGGDRK IAVYDLGGGT FDVSIIEIAE VDGEKQFEVL ATNGDTFLGG EDFDKRVIDY 
LVDEFNKDQG IDLRKDPLAL QRLKDAAERA KIELSSSQQT EVNLPYITAD ASGPKHLNIK 
LTRAKLEALV DDLVRKSIEP CRIALNDAGL RTSDVQEVIL VGGQTRMPKV QQAVADFFGK 
EPRKDVNPDE AVALGAAIQG GVLAGDVKDV LLLDVTPLSL GIETMGGVFT KIIEKNTTIP 
TKASQVFSTA EDGQSAVTVH VLQGEREQAR FNKSLAKFDL AGIEPAPRGQ PQIEVSFDID 
ANGILHVSAK DKKTNKEQKV EVKAGSGLSD SEIQQMVADA EAHREEDKKF QELVQARNHA 
DGLIHSTRSA IKEHGSKVGG ELIGRVEASL AELEAAVKGD DKNQIEAKSK TLEEVAQSLH 
MAATAEQQSA STGAGAGSSA KVDDVVDAEF TEVKGDKK