Gene Xfasm12_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1499 
Symbol 
ID6119940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1564700 
End bp1565815 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content50% 
IMG OID641649488 
ProductTonB protein 
Protein accessionYP_001776044 
Protein GI170730611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAC TGAAGATGAG CCGTACCGTA CCATTGAGCA CACCAATATT GCTTTTACTA 
GCGATGCTAG TGGCATGTTC CAAGCAAGAC GATGAATCGG CTCCCATCGC AGATGCACAA
AGCACACCCA CTGTCCAAGG GACAGGATCA GCATCGCCAT CATCATCACA AAATATGGCT
TTGGATCAGT TACACGAAGC CGCAACTCAA GCGCTACGTG ATAATCGAAT GTATGCACCC
GCCGGAAACA ACGCCGTCGA GTACTACTTA GCACTCCGTG AAAAACAACC CCAAGACGCC
ATCGTCAACA GCGCCTTGAC CGATTTACTA CCTTACACGC TCATCGCAGC AGAACAAAGC
ATTCACCGGA AAGACTTCGA TGAAGCCAGA CGCTTGGTGA ATCTGATTGA AAAAGTGGAT
CCCAACGCAC CAGCATTTCC ACGTCTAAAA CAGGCGTTAA TGAGCGACAC ACATACAAAA
AAATCAGACT CTCAAAAAAT CGTAGAACAT AATTCCAATA AGAAAACCAG TGAGCAGGCA
CACGAAAGGA TGGCCGAGCA ACGTGAAGTG GCCGAGCAAC GTGAAAGAGT CCGTCAGGAA
ATAAACGATT TCGAACGTCA AACCCCAATC AAACGCGATG TTGAGCAACG CACCACACAA
CAACTTAGCT CACCAGTAGC GGTGCCGATA CTGATACAGC CTTCAGTCAA AACACAAGGA
TCTGCAGCTG CTATCACTAC AACAACGCCC ACAACAACAA TATCCACAAC GACACCACAG
ACACCTATAA CAACAGCTGT ACCTGCAACA ACACAGGGAA CTGCACTCTC ACCCATATCG
GTAAAAGCTC CCCCTATAGC ACCAAACCTA CGGCCGATCA GTACGCCAGC ACCAAGGTAT
CCGACAGAGG CGCTACGCGC CGGTATCTCC GGGGAAGTAG TGGTGGAAAT CAAAGTAAGC
ACTGACGGCT CAGTCGCCAA TGCAAGGGTG GTGCAATCCA CACCAGCTCG CGTATTTGAT
CGAGAGGCAC TGCACACAGT CAAAAGGTGG AAATTCGAGC CAATGAAGAA CATGGTCACG
ACGCGCCGCA CGCTATCGTT TACCCCAGGT AACTGA
 
Protein sequence
MLQLKMSRTV PLSTPILLLL AMLVACSKQD DESAPIADAQ STPTVQGTGS ASPSSSQNMA 
LDQLHEAATQ ALRDNRMYAP AGNNAVEYYL ALREKQPQDA IVNSALTDLL PYTLIAAEQS
IHRKDFDEAR RLVNLIEKVD PNAPAFPRLK QALMSDTHTK KSDSQKIVEH NSNKKTSEQA
HERMAEQREV AEQRERVRQE INDFERQTPI KRDVEQRTTQ QLSSPVAVPI LIQPSVKTQG
SAAAITTTTP TTTISTTTPQ TPITTAVPAT TQGTALSPIS VKAPPIAPNL RPISTPAPRY
PTEALRAGIS GEVVVEIKVS TDGSVANARV VQSTPARVFD REALHTVKRW KFEPMKNMVT
TRRTLSFTPG N