| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1475 |
|---|
| Symbol | |
|---|
| ID | 6121338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1545179 |
|---|
| End bp | 1546132 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641649467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001776023 |
|---|
| Protein GI | 170730590 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGT TAAATAAAAT TCGATATGCG TGTTTAGTGT GTACGCTGAT GGCCCTGGTG
ACATTAGCTG GATGCAACTC GGCAGATCGT TCTGCTGAAC CGCCCCAGTC GTCCCACCAA
GGGTCGGAAC AAGAAGGTGC CAAAAAGATT CCTTTGAATG TTGAAGTGTT TAACCTGGGC
GAGCGTTCGA TGTTTGCAGT CTCCTCTGTA TTGGTGACAG GGACTGCGGA TGCTATTTTG
ATTGATACGC AGTTTTCTGC GGCTGATGCG CGTCAGCTTG TAGAGAAAAT AAAAACATCT
GGCAAGCGTC TGAAGGCGAT CTATATCAGT CATGGTGACC CTGATTATTA CTTTGGCCTG
GATAGTGTGC ACGCTGCCTT CCCTGAGGCG AAGGTGTTCG CTACTCCGCA AACTATCGCG
CATATCCAGG CCAGCAAAGA TGCGAAACTG AAACTCTGGG CGCCACAGCT GGGACAGGAT
GCACCGAAAC AAATCTTGAT TCCAGAACCA ATGCAAGGAG ACCAGCTGGT ACTGGAAGGT
CAGGAATTGA GGATTATTGG TATGGATGGT CCGACGCCTG ACCGTACTTT CGTGTGGATT
CCCTCAAGCA GAACAGTTGC TGGCGGTATC TCGGTGATGG GGGCTCAGCA TGTATGGATG
GCTGACACAC AGACCCCACA GTCCCACATG GAGTGGCTGG CTGTGCTGGA TCGGATCAAA
TCAATGGATC CGAAGGTTGT GGTTCCAGGA CATTTTTTGC CTGGCGCGTC GTTGGACGTG
CGCTCGGTGA CGTTCACTGC CGATTATATT CGTGCCTTTG ACGAGGAAAC CGTCAAGGCC
AAGGATTCGG CTGCGTTGAT CGCGGCGATG AAGCAACGTT ATCCCGGACT TGGTGGAGAG
GGATCGCTCG AACTCAGTGC CAAGGTGGCC AAGGGCGAGA TGGAATGGAA GTGA
|
|---|
| Protein sequence | MKALNKIRYA CLVCTLMALV TLAGCNSADR SAEPPQSSHQ GSEQEGAKKI PLNVEVFNLG
ERSMFAVSSV LVTGTADAIL IDTQFSAADA RQLVEKIKTS GKRLKAIYIS HGDPDYYFGL
DSVHAAFPEA KVFATPQTIA HIQASKDAKL KLWAPQLGQD APKQILIPEP MQGDQLVLEG
QELRIIGMDG PTPDRTFVWI PSSRTVAGGI SVMGAQHVWM ADTQTPQSHM EWLAVLDRIK
SMDPKVVVPG HFLPGASLDV RSVTFTADYI RAFDEETVKA KDSAALIAAM KQRYPGLGGE
GSLELSAKVA KGEMEWK
|
|---|
| |