Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1444 |
Symbol | rnc |
ID | 6121307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1508760 |
End bp | 1509443 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641649441 |
Product | ribonuclease III |
Protein accession | YP_001775997 |
Protein GI | 170730564 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATATCAA GTAAGGCCAG CGATTACCAA CAGCGGATTG GCTATGTGTT TACCGATCCA TCTCTGCTGC TGCAAGCACT GCGTCACTGT AGTGCCGGCA CCCCGCACAA TGAGCGCCTG GAGTTCCTCG GCGACAGCGT GGTTAACTTG CTGATCGCCG AAGCGCTTTT CCAACGCTGG CCACGTGCTG ACGAAGGAGC ATTAACCCGT GCCCGTTCCG AACTGGTGCG TGAAACATCT CTGGCCTCGA TTGCACGCAC CATGCAATTA GGGGAGCAAC TCATCCTTGG ACCAGGTGAA CTCAAATCTG GAGGACACCG CCGCGACTCC ATCCTTGCCG ATGCAGTAGA AGCAGTGATT GCAGCCATTT ATCTCGACGC CGATTTAGCA ACGTGCCGTA CTGTGGTGTT ACCGTGGTTT GAAACAGCAC TCACCGCATT GCCTGTTGGC AAACCCGAAA AAGACCCGAA AACTCGACTC CAAGAATGGC TACAAGCACG CCAGTGGTCA TTACCCGTGT ATGAATTGAT CTTCGAGAGC GGCGATCCTC ATACCAAGCA CTTCCGAGTG AGTTGCACTC TGGGTGAACT AAAACTGCGC ACCGAAGGCG AAGGCAGCTC ACGCCGTCTC GCCGAGCAAG ACGCTGCCTC TCACGCCATC AACCAACTGG ATTCAAACAA GTGA
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Protein sequence | MISSKASDYQ QRIGYVFTDP SLLLQALRHC SAGTPHNERL EFLGDSVVNL LIAEALFQRW PRADEGALTR ARSELVRETS LASIARTMQL GEQLILGPGE LKSGGHRRDS ILADAVEAVI AAIYLDADLA TCRTVVLPWF ETALTALPVG KPEKDPKTRL QEWLQARQWS LPVYELIFES GDPHTKHFRV SCTLGELKLR TEGEGSSRRL AEQDAASHAI NQLDSNK
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