| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1440 |
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| Symbol | |
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| ID | 6121303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1503926 |
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| End bp | 1505470 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649437 |
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| Product | periplasmic protease |
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| Protein accession | YP_001775993 |
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| Protein GI | 170730560 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.511031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC GTATCCATAC ACGATGCTTC GGCCTACTCG CTATCACCTT GCCGTTAGCT
GCCTGTGGCG CGCAACACAA CAACAGCCCC ACTCCCACTG CACACTCCAC TCCCATTGTG
ACCCCCAGCA CCACCCCAGC ACCACAGCTC GTGGCTGGGT TGCCAGATTT CACCCAACTG
GTCGACCAAG TAGGGCCTGG TGTGGTCAAC ATTGAAACCG TCATTACCCG TAAGAAAGTC
GGGAAACGTC GCGGCATACC GCTTGACAAC GATATACCCG AGTTTTTCCG GCGTTTCTTT
GGCCCAGATT TCCAGATGCC GAACCAACCT CGTGGCGGCC AGGATGACGA GGGAGGTATC
GCTGGTCGGG GAATGGGCTC TGGCTTCATC ATTTCCAAAG ACGGCTACAT ACTCACCAAC
CATCACGTCA TCACTGGCGC AAGCGAGGTC ACAATCAAAT TGACTGATCG CCGCGAATTC
AAAGCAAAAG TCATCGGTAG CGACGAACAG TACGATGTTG CTTTACTCAA AATAGATGCA
AAAAATCTAC CCACCGTGCG TATCGGCGAC TCCAGTTCAC TTAAACCTGG TCAGTGGGTC
GTTGCGATCG GCTCCCCCTT CGGATTAGAT CACTCAGTCA CTGCAGGGAT AGTCAGCGCC
CTGGGACGCA GCACCAGTGA CGATCAACGC TATGTCCCAT TTATCCAAAC CGACGTACCC
ATTAACCAGG GAAATTCTGG TGGTCCATTG CTGAATACCC GAGGTGAAGT GATTGGTATC
AACTCGCAAA TATTTTCCGC CTCAGGCGGC TACATGGGTA TTAGCTTTGC CATTCCAATC
AATTTGGCAA TCAACGCTGC CGAACAAATC CGTAAAACAG GCAAAGTGCA ACGCAGTATG
CTCGGTGTGG AAATCGGCCC TATCGACGCA CTCAAAGCTC AAGGCTTAGG CTTACCGGAC
AGCCGAGGCG CACTGGTCAA TAACATTCCA CCCCACAGCC CGGCCGCCAA AGCAGGGATT
GAAGTCGGTG ACGTCATCCG CTCAGTGAAC GGCAAAGTAA TCAGTAGCTT CAGCGATCTG
CCTCCACTGA TCGGCATGAT GCCGCCAGGC ACCAAAGCCA CCCTGGGTAT TATCCGTGAC
GGCAAACCGC GTGAGATCGT CGTCACTCTT TCGGCACTCA ATCAGGATGC AACAGCCAGC
GAAGATGAAG ACGACACAGC ACCTTCCAAA CAAGAAACCT CTGCCAATGT CGAACTGCTC
GGCCTTCAAG TCGAAAACCT GAGCGCTGCT GAGCGCGAAC GCCTGGCCTC ATCGCAAAAC
GCGAAGGGAG GAGTCCGTAT CACGGCAGTC ACAGCGCCGT GGGCACGCAA CGCCAGCCCG
CCATTAGTGG AAGGTTTAGT TATCCTAAGG ATCGGCCGCA CTCCGGTTAG CAATGTGGCA
GAACTGAACC GTGTCCTAGG AAATTATAAG AAGGGAGATG TCATCATGCT GCTGGTGATC
AACGACCGTG GCACGTTCCA CAGTGCGTTG AAAGCAGGCG GCTAA
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| Protein sequence | MNSRIHTRCF GLLAITLPLA ACGAQHNNSP TPTAHSTPIV TPSTTPAPQL VAGLPDFTQL
VDQVGPGVVN IETVITRKKV GKRRGIPLDN DIPEFFRRFF GPDFQMPNQP RGGQDDEGGI
AGRGMGSGFI ISKDGYILTN HHVITGASEV TIKLTDRREF KAKVIGSDEQ YDVALLKIDA
KNLPTVRIGD SSSLKPGQWV VAIGSPFGLD HSVTAGIVSA LGRSTSDDQR YVPFIQTDVP
INQGNSGGPL LNTRGEVIGI NSQIFSASGG YMGISFAIPI NLAINAAEQI RKTGKVQRSM
LGVEIGPIDA LKAQGLGLPD SRGALVNNIP PHSPAAKAGI EVGDVIRSVN GKVISSFSDL
PPLIGMMPPG TKATLGIIRD GKPREIVVTL SALNQDATAS EDEDDTAPSK QETSANVELL
GLQVENLSAA ERERLASSQN AKGGVRITAV TAPWARNASP PLVEGLVILR IGRTPVSNVA
ELNRVLGNYK KGDVIMLLVI NDRGTFHSAL KAGG
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