| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1432 |
|---|
| Symbol | |
|---|
| ID | 6121295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1490874 |
|---|
| End bp | 1493147 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649429 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_001775985 |
|---|
| Protein GI | 170730552 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATA TGCGTGCATC ATCTCCAGAA ACGACTTCTG CCGTGAAGTG TCCTTTCAAT
AAGACAGCGG TTGAAGGGAC TCACAATAAA GACTGGTGGC CCAATCAGTT ACGTGTGGAT
TTGCTGCATC AGCATTCGAA TAAGTCCAAT CCACTGGGTG AAACGTTCGA TTACGCCAAA
GTGTTCCAGA AACTCGATTA CGCTGCGTTG AAGCGTGATT TACATGCATT GATGACCGAT
TCGCAGGATT GGTGGCCTGC TGACTTTGGT CATTACGGCG GTTTGTTTAT CCGTATGGCT
TGGCATAGTG CCGGCACCTA TCGTATCGGT GATGGTCGTG GTGGTGCTGG CCGTGGCCAG
CAGCGCTTCG CGCCGCTCAA TAGCTGGCCG GATAATGTCA GCCTGGACAA GGCACGTCGT
CTGCTTTGGC CGATCAAGAA AAAGTATGGT CAGCAGATTT CTTGGGCCGA TCTGATTGTG
CTTGCCGGTA ACGTTGCGTT GGAATCAATG GGGTTTAAAA CCTTTGGTTT CGCTGGTGGT
CGTGTGGATA CCTGGGAACC TGATCAGGAT GTGTATTGGG GCAGGGAGAT GACCTGGCTT
GGTGGGGATG TTCGTTATGG AGCTGTCTCG GAAGGTGTAC ACCATCCAGA TGAACATAGT
GGAGCAAAGG AGAAGGCTTC CAAGAATAGC GATTCGCGTG TGTTGGAAAA TCCGTTGGCT
GCTGTGCAGA TGGGATTGAT TTATGTCAAT CCTGAAGGTC CGGATGGCCG TCCAGATCCG
CTCGCTTCTG CTCGCGATAT TCGCGAAACG TTTGCTCGCA TGGCAATGAA TGATGAGGAG
ACTGTGGCGT TGATCGCCGG TGGCCACACC TTCGGAAAAA CACACGGCGC GGCTCCAGCA
GACAACGTCG GTCCTGAGCC GGAAGCCGGG GAGTTGGAGC AGCAGGGCTT GGGGTGGCAC
AACCGCTTTG GTAGCGGCAA GGCGGGGGAT ACGATTACCA GCGGTTTGGA GGTGACATGG
ACTAAGACTC CAACACAATG GAGCAACGAT TTTTTTGAGC ACTTGTTTGG TTACGAATGG
GAGTTGACCA AAAGTCCTGC CGGCGCCTAT CAGTGGGTGG CTAAGGATGC TGCAGCGACG
ATCCCGCATG CGCACGATCC GTCGAAGAAA TTACTGCCGA TGATGCTGAC ATCGGATTTA
GCGTTGCGTT TTGATCCGGT CTACGAAAAG ATTTCGCGGC ATTTCCATGC GCATCCAGAC
CAGTTCGCCG ATGCGTTTGC TCGGGCTTGG TTCAAGTTGA CGCATCGTGA TATGGGGCCG
CGTGTCCGTT ACCTTGGCCC AGAGGTTCCG GCTGAAGAAT TGATTTGGCA GGACCCAGTT
CCTAAGGTCA GCCATGTGTT AGTTGATGCG CAGGACCTTC TTGCGTTGAA GCATAAAATT
TCTGCTTCTG GGTTAGGAAT CTCGCAGCTC GTTTCGACGG CTTGGGCATC GGCCTCCACG
TTCCGTGGCT CGGATAAGCG CGGCGGCGCC AATGGGGGGC GTCTTTGCTT GGCTCCGCAA
AATCAGTGGG AGGTCAATCA GCCGCAGCAA CTGAGTGTGG TGCTGGAAAC ATTGCGGCGT
GTCCAGACTG AATTCAACGC CCAAGCAGGA GACAAACGCA TTTCTTTGGC AGATTTGATT
GTATTGGCTG GCGGTGTAGG CGTGGAGCAG GCGGCGAAGC GTGTCGGTAT CGTGGTGGAG
GTCCCTTTTG TGCCGGGACG TACCGACGCT TTGCAGGAGC AAACTGATGT CAGTTCATTT
GCTCCTCTGG AGCCGTTTGC TGATGGGTTC CGAAACTATG TCAAGGGAGA TGAAGTTGTC
CCGTCTGAGC ATCTTTTGAT TGATCGTGCC CAGTTACTGA CATTGACTGC ACCGGAGATG
ACGGTATTGA TCGGCGGTTT GCGGGTCTTG GGTGCCAACG TTGGCGGTGT GAAGCACGGT
GTGTTTACAG ATCGTCTGGG GACGTTGAGT AACGATTTCT TTATCAATCT ACTCGACATG
GGGACGGAGT GGGCCCCCGT TTCCAAAGAG CGTCATGTGT TCGAAGGACG TGATCGTCGC
ACCGGTGTGC TGAAATGGAC GGGTACCCGT GTTGATCTGG TCTTTGGCTC GAATGCACTG
TTACGTGCGT TAGCAGAAGT CTATGCCGCA GTGGATGCTC AAGAGAAGTT TGTACGCGAT
TTTGTCGCAG CTTGGAGCAA AGTCATGCAT TTGGATCGCT TTGATTTGGT GTGA
|
|---|
| Protein sequence | MRDMRASSPE TTSAVKCPFN KTAVEGTHNK DWWPNQLRVD LLHQHSNKSN PLGETFDYAK
VFQKLDYAAL KRDLHALMTD SQDWWPADFG HYGGLFIRMA WHSAGTYRIG DGRGGAGRGQ
QRFAPLNSWP DNVSLDKARR LLWPIKKKYG QQISWADLIV LAGNVALESM GFKTFGFAGG
RVDTWEPDQD VYWGREMTWL GGDVRYGAVS EGVHHPDEHS GAKEKASKNS DSRVLENPLA
AVQMGLIYVN PEGPDGRPDP LASARDIRET FARMAMNDEE TVALIAGGHT FGKTHGAAPA
DNVGPEPEAG ELEQQGLGWH NRFGSGKAGD TITSGLEVTW TKTPTQWSND FFEHLFGYEW
ELTKSPAGAY QWVAKDAAAT IPHAHDPSKK LLPMMLTSDL ALRFDPVYEK ISRHFHAHPD
QFADAFARAW FKLTHRDMGP RVRYLGPEVP AEELIWQDPV PKVSHVLVDA QDLLALKHKI
SASGLGISQL VSTAWASAST FRGSDKRGGA NGGRLCLAPQ NQWEVNQPQQ LSVVLETLRR
VQTEFNAQAG DKRISLADLI VLAGGVGVEQ AAKRVGIVVE VPFVPGRTDA LQEQTDVSSF
APLEPFADGF RNYVKGDEVV PSEHLLIDRA QLLTLTAPEM TVLIGGLRVL GANVGGVKHG
VFTDRLGTLS NDFFINLLDM GTEWAPVSKE RHVFEGRDRR TGVLKWTGTR VDLVFGSNAL
LRALAEVYAA VDAQEKFVRD FVAAWSKVMH LDRFDLV
|
|---|
| |