| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1385 |
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| Symbol | |
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| ID | 6119906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1439336 |
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| End bp | 1440448 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649387 |
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| Product | membrane-bound lytic transglycosylase |
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| Protein accession | YP_001775943 |
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| Protein GI | 170730510 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0841166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC GCATAGCAAC CTCAATACTG ACTCTCGGCC TCGTTGCCTG TGCATCGCAA
CCCTCATCCA AGCGGCTAGT CAGTACAACG ACAACAGAAC CAACGAAAAA GATAGATCCC
TCAAAAGTGG AAGAAACACC ACTGAATCTG TCGCCTGTCC CATTCGAAAT CGCGCGTAAC
AATTTCATAC GTGATACTGC AACCAAGTAC AACTTGGACC CGATATGGAT CGAAAAAACC
CTAGCACAAG CCCAATTTAA AGACGCAATA GTAGCGGCCA TGTCGCGCCC AGCCGAGCAA
GTCAAACCGT GGAACGAATA CCGATCAATG TTCATCGCTC AGGCAAGAAT TGACAGTGGA
CGTCAATTCT TAGCCTCTCA CAAGATACAA CTCAAAAAAG TCGAAGCTGC TACCGGCGTA
CCAGCAGAAC TCATCGTCGC AATTATTGGT GTCGAAAGCA GCTATGGTAC TAGCCCCGGG
AAATACCGCG TACTGGACGC GCTATACACA CTCGCCTTTA AATACCCGCG CAGCGGCGAC
CCAAACAAAC TCAAACGCGA AGTACAACGG GAATTATTTT TTCGCGATGA ACTCGCCCAA
CTATTCGCAC TCAGTAAAGA AGAAAACCTG GATATCACCA CATTGACTGG CAGTTACGCC
GGAGCAATGG GCATGGGACA GTTCATGCCC TCCAGCTATC GTCAATATGC AGTAGACGGC
GATGGGGACG GCAAACGCAA CCTATTCACC AACGAGGATG ACGTATTCGC TTCGATCGCC
AACTACTTCC TCCGAAAAGG AGGCTGGGTA CGTGGCGCTC TGGTCGCAGT ACCAGCCACC
CTCGCTTCGG GTTACCAAGA ATTCGACCCA CCCGACTGGA TCCCGCGTTA CACCCTGACC
GAATTAGCCG CACGTGGCTA CCATACCTAT GTTCCCGTCA CAGCCGGTAT CACCGCCACC
CCGATCAGTC TGGACAACAC CACCAGTAAA GAATACTGGC TGTGCTTCCA GAACTACTAC
GCGATTACCC GCTACAACCC CTCCAAAATG TACGCCATGG CCGTGTTCCA ACTGTCCGAA
TCCATTGCCG GCCGCACACT CCCCCAAACA TGA
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| Protein sequence | MIKRIATSIL TLGLVACASQ PSSKRLVSTT TTEPTKKIDP SKVEETPLNL SPVPFEIARN
NFIRDTATKY NLDPIWIEKT LAQAQFKDAI VAAMSRPAEQ VKPWNEYRSM FIAQARIDSG
RQFLASHKIQ LKKVEAATGV PAELIVAIIG VESSYGTSPG KYRVLDALYT LAFKYPRSGD
PNKLKREVQR ELFFRDELAQ LFALSKEENL DITTLTGSYA GAMGMGQFMP SSYRQYAVDG
DGDGKRNLFT NEDDVFASIA NYFLRKGGWV RGALVAVPAT LASGYQEFDP PDWIPRYTLT
ELAARGYHTY VPVTAGITAT PISLDNTTSK EYWLCFQNYY AITRYNPSKM YAMAVFQLSE
SIAGRTLPQT
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