| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1258 |
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| Symbol | hemC |
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| ID | 6121200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1325456 |
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| End bp | 1326373 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649269 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001775827 |
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| Protein GI | 170730394 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAC TTCGTATTGC TACTCGCAAA AGTTTACTTG CTATGCGGCA AAGCGAGTAT
GTCGCTGCGC GTTTACGTAT GCTGTGCCCT GATTTAGATG TGGTGTTGGT GCCGATGAGC
ACTCGTGGCG ATGAGATCCT GGACCGCTCC CTGGCTGCAA TTGGTGGTAA AGGGCTGTTT
CTCAAGGAGC TGGAACTGGC GATGTTACGT GGTGATGCTG ATTGCGCGGT GCATTCGCTG
AAAGATGTGC CTATGGATTT GGAGCCCCCA TTTATGCTTG CGGCTGTTTT GAGTCGTGAT
GACCCGGCCG ATGCGCTGAT TTCTAATGTC TACCTTTCGC TAGAGTCACT CCCAATTGGG
GCGCGTGTGG CGACTTCTTC GCTGCGCCGA CAAGCCCAGT TACGCTTTTA TCGGCCTGAC
CTGCGGTTGT TTGACTTGCG GGGTAACGTT AACACGCGCT TGGCGAAGCT TGATAACGGA
GATTACGATG CGATTGTGCT GGCTTGTGCG GGGTTACGTC GGCTGGGATT GGAGCAACGC
ATGACGGCTC GGCTAGCACC GCCAGAATGG TTACCTGCGC CAGGTCAGGG GGCGATTGCG
GTGGAGTCAC TGACCGAGGA TGCTCGGATC GGTACGTTGT TGGCTGGTCT TGACGATCTG
CCAACGCGCC AATGCGTGGT GGCTGAGCGT ACGATGAATC GTGCTCTTCA TGGTAGCTGC
CATGTGCCAG TGGGGGCTTA TGCATCCTAC GGAGTTGGTG GTATGCGATT ACAGGGCTTG
GTGGGTTGTG TTGCCGATGG TCGTCTCGTG CGTGCGGAGC TGTGTTCGGC AAAGGATGAG
GGCGATATGC TCGGCAGGGC AGTCGCACAG TGCTTGTTGG ATGCTGGTGC GGCTGAGTTG
CTAGCCGCCA CTGCATAG
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| Protein sequence | MPLLRIATRK SLLAMRQSEY VAARLRMLCP DLDVVLVPMS TRGDEILDRS LAAIGGKGLF
LKELELAMLR GDADCAVHSL KDVPMDLEPP FMLAAVLSRD DPADALISNV YLSLESLPIG
ARVATSSLRR QAQLRFYRPD LRLFDLRGNV NTRLAKLDNG DYDAIVLACA GLRRLGLEQR
MTARLAPPEW LPAPGQGAIA VESLTEDARI GTLLAGLDDL PTRQCVVAER TMNRALHGSC
HVPVGAYASY GVGGMRLQGL VGCVADGRLV RAELCSAKDE GDMLGRAVAQ CLLDAGAAEL
LAATA
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