Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1200 |
Symbol | |
ID | 6120420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1263970 |
End bp | 1266153 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641649217 |
Product | C-terminal processing peptidase |
Protein accession | YP_001775779 |
Protein GI | 170730346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.573816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTAC GAATCCTTAA CTCCTTGAAA GTTGCCCTAC TAACCCTGGC TATCACTACC GCTCCAGCGT TGATGGCCAA ATCGGACAGC GCATCTCCTC AAGTGGCGAC GCCAGACCAA ACCACAGCGA CCAAGCTGGT GTATGGTCTG CTTTCAGATA GTCGTTATGC TTATCGGCTG CGCCCGCTTG ACGAAGCGAT GTCCAAAGAC ATTTTCAAGC GCTACTTGGA AGCCCTAGAC AGCAATAAGC AATTTTTTAC TGAAGCCGAT ATCGACAACT TCTCAGCATT CAAAGCTGAG ATACCTGATT CAATCCGCAA CGGCAATCTC AAGCCAGCGT TTAGTATATT TGCGGTGTAT AAAAAGCGCG TTGCTGAGCG TGTTACCTAT GCAAATCAGT TACTGAAACA AAACTTCGAT TTTTCTGGGC AAGAAAAATA CGAATACGAT CGTAGCAAAG CGCCATGGCC AGCCAGCCCG CAAGATCTGG ACGACATCTG GCGACGATCA ACAATGAACG ACTGGCTACG CCTGAAGTTG GCCGGCAAAA AGCCCGAAGA CATTCGGAAA ACTCTTAAAA AACGCTACGC CAACCTTCTT AAGACAGTGA ACGAGCTAAA AGGTGAAGAC GTCTTTCAGT TGTATCTGAA CGCCTACACT AATTCGATCG ATCCTCATAC CGACTACTTC ACTCCACGCA CAGCCGATGC TTTCAACCAG CAGATGTCAT TGTCACTAGA AGGTATCGGT GCCCAGCTGC AAAAGCAGGA AGACATGGTG ATCATCCGTG AGGTGATTCC TGGAGGCCCC ACTGCGTTGG ATGGCACACT GAAACCCGGT GATCGCATCG TCGGCGTTGG TCAGGGCAAA GGCGGCCCAA TTGAAGATGT CATCGGCTTA CGCATCGACG ATGTCGTCTC CAAGATCCGC GGCAAGAAAG ACACCCAGGT ACGACTTGAA TATATTCCAG CCGAATCTGG AATCGACGGC GCACACCGTA TCGTGACTCT TACACGACAG AAGGTACGCT TAGCTGAGCA GGCCGCGAAG GGCGAAACCA TTACCATAGA GGGCAGCAAC GGCGACGCAC AGCGCCGCAT CGGCATCATC AAGCTGCCAA CGTTCTACGA GGATTTCGAA GGGCGTCGCC GCAACGTCGC CAACTATACG TCTGCAACAC GAGATGTAGC GAAGCTTTTA ACCAACTTCA AAACTGACAA AGTCGATGGT GTGGTACTCG ATCTGCGTAA CAACGGCGGC GGATCGCTGG ATGAAGCCAT TCAGCTCACT GGTCTATTCA TCGAACAAGG TCCTGTGGTG CAAGTACGTG AGTCCGGGGG CCGTGTCACT GTCAACGGTG ATCGAGACGA CAAAGTCACC TGGGACGGCC CGCTGGCAGT ATTGATCAAT CGTGGCTCCG CTTCTGCATC AGAAATTTTT GCAGGTGCCA TCCAAGACTA TGGGCGTGGT TTGGTGATTG GAGAAACCAG CTTTGGTAAA GGCACAGTCC AAAATATTGT TGACCTGGAT CGTTGGCCGG CCAACGAAAG CAGACGATTT GGCCAAGTCA AATTGACCAT TGCTCAATTC TTCCGTATCA GCGGATCCAG CACCCAGCAC AAAGGAGTGT TACCAGACAT TGCGTTCCCA GCAAGCGTAG GTGCCACTGA GTTTGGGGAG AGCACTTATG AAAATGCCTT GCCTTGGACT CAAATTGCCT CGCTCCAACA CACCCAATAT GGCAATTTCA GCCCAATATT ATCGAAACTG AAAAAAATTC ATATCAGTCG CACTGCCAAT GACATTGAAT TCAAATGGTG GCAAGAGGAT GTACATAATT TCAGTCTGGA AAAGGAAAAG AAGTACGTCA TACTCAACGA AGCCAAACGT CTTGCAGAAC GTAGAAAACA AGAAACTCAA CATAGAGAAC GCCAAACTAT TCGGAAAAAC CTTGGCTTGC AGCTAGATCC TTTGTCTGAG GAGAGTGACG ACGGATTGAT TGGCAACGAG CGTGATATCG CCAAGGACAC TGCACGCGAA AAGCTGGCCG ACAAGCGTCC TGACCCTTTA TTGCATGAAT CAGCCGCAAT TCTGACCGAT ACAATCAACC TACTGGAAAA AGACCAGATA CTATCGGCAC AGGTACTTTT ACAGTCCACC ACACCGGGAC ACTGGGCCAA TTGA
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Protein sequence | MRLRILNSLK VALLTLAITT APALMAKSDS ASPQVATPDQ TTATKLVYGL LSDSRYAYRL RPLDEAMSKD IFKRYLEALD SNKQFFTEAD IDNFSAFKAE IPDSIRNGNL KPAFSIFAVY KKRVAERVTY ANQLLKQNFD FSGQEKYEYD RSKAPWPASP QDLDDIWRRS TMNDWLRLKL AGKKPEDIRK TLKKRYANLL KTVNELKGED VFQLYLNAYT NSIDPHTDYF TPRTADAFNQ QMSLSLEGIG AQLQKQEDMV IIREVIPGGP TALDGTLKPG DRIVGVGQGK GGPIEDVIGL RIDDVVSKIR GKKDTQVRLE YIPAESGIDG AHRIVTLTRQ KVRLAEQAAK GETITIEGSN GDAQRRIGII KLPTFYEDFE GRRRNVANYT SATRDVAKLL TNFKTDKVDG VVLDLRNNGG GSLDEAIQLT GLFIEQGPVV QVRESGGRVT VNGDRDDKVT WDGPLAVLIN RGSASASEIF AGAIQDYGRG LVIGETSFGK GTVQNIVDLD RWPANESRRF GQVKLTIAQF FRISGSSTQH KGVLPDIAFP ASVGATEFGE STYENALPWT QIASLQHTQY GNFSPILSKL KKIHISRTAN DIEFKWWQED VHNFSLEKEK KYVILNEAKR LAERRKQETQ HRERQTIRKN LGLQLDPLSE ESDDGLIGNE RDIAKDTARE KLADKRPDPL LHESAAILTD TINLLEKDQI LSAQVLLQST TPGHWAN
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