Gene Xfasm12_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1200 
Symbol 
ID6120420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1263970 
End bp1266153 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content50% 
IMG OID641649217 
ProductC-terminal processing peptidase 
Protein accessionYP_001775779 
Protein GI170730346 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.573816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAC GAATCCTTAA CTCCTTGAAA GTTGCCCTAC TAACCCTGGC TATCACTACC 
GCTCCAGCGT TGATGGCCAA ATCGGACAGC GCATCTCCTC AAGTGGCGAC GCCAGACCAA
ACCACAGCGA CCAAGCTGGT GTATGGTCTG CTTTCAGATA GTCGTTATGC TTATCGGCTG
CGCCCGCTTG ACGAAGCGAT GTCCAAAGAC ATTTTCAAGC GCTACTTGGA AGCCCTAGAC
AGCAATAAGC AATTTTTTAC TGAAGCCGAT ATCGACAACT TCTCAGCATT CAAAGCTGAG
ATACCTGATT CAATCCGCAA CGGCAATCTC AAGCCAGCGT TTAGTATATT TGCGGTGTAT
AAAAAGCGCG TTGCTGAGCG TGTTACCTAT GCAAATCAGT TACTGAAACA AAACTTCGAT
TTTTCTGGGC AAGAAAAATA CGAATACGAT CGTAGCAAAG CGCCATGGCC AGCCAGCCCG
CAAGATCTGG ACGACATCTG GCGACGATCA ACAATGAACG ACTGGCTACG CCTGAAGTTG
GCCGGCAAAA AGCCCGAAGA CATTCGGAAA ACTCTTAAAA AACGCTACGC CAACCTTCTT
AAGACAGTGA ACGAGCTAAA AGGTGAAGAC GTCTTTCAGT TGTATCTGAA CGCCTACACT
AATTCGATCG ATCCTCATAC CGACTACTTC ACTCCACGCA CAGCCGATGC TTTCAACCAG
CAGATGTCAT TGTCACTAGA AGGTATCGGT GCCCAGCTGC AAAAGCAGGA AGACATGGTG
ATCATCCGTG AGGTGATTCC TGGAGGCCCC ACTGCGTTGG ATGGCACACT GAAACCCGGT
GATCGCATCG TCGGCGTTGG TCAGGGCAAA GGCGGCCCAA TTGAAGATGT CATCGGCTTA
CGCATCGACG ATGTCGTCTC CAAGATCCGC GGCAAGAAAG ACACCCAGGT ACGACTTGAA
TATATTCCAG CCGAATCTGG AATCGACGGC GCACACCGTA TCGTGACTCT TACACGACAG
AAGGTACGCT TAGCTGAGCA GGCCGCGAAG GGCGAAACCA TTACCATAGA GGGCAGCAAC
GGCGACGCAC AGCGCCGCAT CGGCATCATC AAGCTGCCAA CGTTCTACGA GGATTTCGAA
GGGCGTCGCC GCAACGTCGC CAACTATACG TCTGCAACAC GAGATGTAGC GAAGCTTTTA
ACCAACTTCA AAACTGACAA AGTCGATGGT GTGGTACTCG ATCTGCGTAA CAACGGCGGC
GGATCGCTGG ATGAAGCCAT TCAGCTCACT GGTCTATTCA TCGAACAAGG TCCTGTGGTG
CAAGTACGTG AGTCCGGGGG CCGTGTCACT GTCAACGGTG ATCGAGACGA CAAAGTCACC
TGGGACGGCC CGCTGGCAGT ATTGATCAAT CGTGGCTCCG CTTCTGCATC AGAAATTTTT
GCAGGTGCCA TCCAAGACTA TGGGCGTGGT TTGGTGATTG GAGAAACCAG CTTTGGTAAA
GGCACAGTCC AAAATATTGT TGACCTGGAT CGTTGGCCGG CCAACGAAAG CAGACGATTT
GGCCAAGTCA AATTGACCAT TGCTCAATTC TTCCGTATCA GCGGATCCAG CACCCAGCAC
AAAGGAGTGT TACCAGACAT TGCGTTCCCA GCAAGCGTAG GTGCCACTGA GTTTGGGGAG
AGCACTTATG AAAATGCCTT GCCTTGGACT CAAATTGCCT CGCTCCAACA CACCCAATAT
GGCAATTTCA GCCCAATATT ATCGAAACTG AAAAAAATTC ATATCAGTCG CACTGCCAAT
GACATTGAAT TCAAATGGTG GCAAGAGGAT GTACATAATT TCAGTCTGGA AAAGGAAAAG
AAGTACGTCA TACTCAACGA AGCCAAACGT CTTGCAGAAC GTAGAAAACA AGAAACTCAA
CATAGAGAAC GCCAAACTAT TCGGAAAAAC CTTGGCTTGC AGCTAGATCC TTTGTCTGAG
GAGAGTGACG ACGGATTGAT TGGCAACGAG CGTGATATCG CCAAGGACAC TGCACGCGAA
AAGCTGGCCG ACAAGCGTCC TGACCCTTTA TTGCATGAAT CAGCCGCAAT TCTGACCGAT
ACAATCAACC TACTGGAAAA AGACCAGATA CTATCGGCAC AGGTACTTTT ACAGTCCACC
ACACCGGGAC ACTGGGCCAA TTGA
 
Protein sequence
MRLRILNSLK VALLTLAITT APALMAKSDS ASPQVATPDQ TTATKLVYGL LSDSRYAYRL 
RPLDEAMSKD IFKRYLEALD SNKQFFTEAD IDNFSAFKAE IPDSIRNGNL KPAFSIFAVY
KKRVAERVTY ANQLLKQNFD FSGQEKYEYD RSKAPWPASP QDLDDIWRRS TMNDWLRLKL
AGKKPEDIRK TLKKRYANLL KTVNELKGED VFQLYLNAYT NSIDPHTDYF TPRTADAFNQ
QMSLSLEGIG AQLQKQEDMV IIREVIPGGP TALDGTLKPG DRIVGVGQGK GGPIEDVIGL
RIDDVVSKIR GKKDTQVRLE YIPAESGIDG AHRIVTLTRQ KVRLAEQAAK GETITIEGSN
GDAQRRIGII KLPTFYEDFE GRRRNVANYT SATRDVAKLL TNFKTDKVDG VVLDLRNNGG
GSLDEAIQLT GLFIEQGPVV QVRESGGRVT VNGDRDDKVT WDGPLAVLIN RGSASASEIF
AGAIQDYGRG LVIGETSFGK GTVQNIVDLD RWPANESRRF GQVKLTIAQF FRISGSSTQH
KGVLPDIAFP ASVGATEFGE STYENALPWT QIASLQHTQY GNFSPILSKL KKIHISRTAN
DIEFKWWQED VHNFSLEKEK KYVILNEAKR LAERRKQETQ HRERQTIRKN LGLQLDPLSE
ESDDGLIGNE RDIAKDTARE KLADKRPDPL LHESAAILTD TINLLEKDQI LSAQVLLQST
TPGHWAN