| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1190 |
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| Symbol | ubiB |
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| ID | 6120410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1254749 |
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| End bp | 1256407 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649209 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001775771 |
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| Protein GI | 170730338 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.601295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGT TATTCCGGGC CTGCCGCATT GGCAAGGTCA TGCTGCGCTA CCGCCTGGAT
ACGTTGCTAG ACGGTACAGC CGCAGAGCGC TGGTTGCGTT TGGCTAAGCC TTTTGTACCT
CGCATCAGCG CTGAGATTGT TGAGCAGTCC AGAGGGCGTC GGTTGCGTTT GGCACTACAG
GAATTGGGGC CTATTTTTGT GAAGTTTGGG CAGATTTTGT CCACTCGTAG GGACCTGGTA
CCCCAGGATA TCGGTGATGA GCTGGTCATG CTACAAGACC GAGTAGAGCC TTTCGAGGGG
CAGACTGCGC GCATTATCAT CGAAACTGCG CTAGGCAAGT CGGTTGAAAG TGCATTCGCC
CACTTCGATA CTGTGCCACT GGCCAGTGCT TCAATCTCGC AGGTCCATGC AGCTACGCTG
CATGACCGAC GTGAAGTTGT GGTCAAAGTG TTGCGTCCTG ATATTGAGCA TCAGATCAGT
GACGACATCG CCTTGCTTAA ATCGCTGGCT ACGTTGGTCG AGCATACTCA CCCTAATGCG
GATAAAATCC GTCCGCGCGA GATTGTGGCG GAGATAGAAA CCACCTTGGC GGCTGAGTTG
GATTTGCAAC GTGAAGGTGC TAACGCTAGC GTGTTGCGTC GCTTCTGGGA GGCGTCCGAC
GACATATATG TACCTGAAGT AATTTGGTCG CACACCGCCG AACGGGTGCT GACTCTGGAA
CGTATGTATG GCATTCCCTC GGACGATATT GCGTTGCTTG ATGCCTCGGG TATCGATCGT
AAAGCTCTTT CGAGCAAGGG AATCCGCGTG TTTTATACCC AGGTGTTCCG CGATAATTTT
TTCCATGCCG ATGCGCACTC TGGAAATATT TGGGTCGACA GTGATCCGGC ACGCAAATCC
AATCCACGTT TTATTGCGCT GGATTTCGGC ATCATGGGCC AGCTGTCGCA GAAAGATCAG
TACTATTTGG CAGAGAATTT CATGGCCATC TTCCATAAAG ACTACCGGCG AATCGCTGAG
TTGCATGTGG AAGCAGGCTG GATACCTCAG CATGTCCGCA TTGAGGAGTT GGAAGCAGCG
GCACGTTCAG TCTGTGAACC ATACTTTACG AGGCCTTTAT CCCAGATCTC GCTTGCTGAA
GTACTGATGA AATTGTTCCA TGTTGCCCGA CGTTACCAGC TTACGTTACA GCCTCAATTG
ATTTTGCTTC AAAAGACGCT GCTCAATATT GAGGGTGTGG GTCGTCAACT CGATCCTGAA
TTGGATATCT GGGTCGTAGC GCGCCCTGTG CTCGAGCGCA TTCTACGTGC CCGTTACAGT
CCGCGTCATG CGTTGAAGGA GTTAAATAAA CGCTTGCCTG AGATCATGAC TCATGCCCCA
GACACACCGC GCCTCATACA TACTTGGTTA GTACAGCAGG TCGAAAGCCG GAAACAGAAT
GACGTTTATT TGCAACAAAT ACGCGCGTTA GCTATGACTT TGCAAGGCTT GCAGCGCCGT
GTGGTCAATG CGATTGTGGG TAGCGGCTTG CTGGTGGCGG CTGCGGTATT GTATGGCCTA
CATCCGGATG GTTTGTACTT GGGAACGATT CCAGTGTGGA GCTTGATTAG TGGGTGCGTC
GGCGCGTTGG CCTTGTTCAG TGCTTGGTGG CGAAGCTAA
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| Protein sequence | MKALFRACRI GKVMLRYRLD TLLDGTAAER WLRLAKPFVP RISAEIVEQS RGRRLRLALQ
ELGPIFVKFG QILSTRRDLV PQDIGDELVM LQDRVEPFEG QTARIIIETA LGKSVESAFA
HFDTVPLASA SISQVHAATL HDRREVVVKV LRPDIEHQIS DDIALLKSLA TLVEHTHPNA
DKIRPREIVA EIETTLAAEL DLQREGANAS VLRRFWEASD DIYVPEVIWS HTAERVLTLE
RMYGIPSDDI ALLDASGIDR KALSSKGIRV FYTQVFRDNF FHADAHSGNI WVDSDPARKS
NPRFIALDFG IMGQLSQKDQ YYLAENFMAI FHKDYRRIAE LHVEAGWIPQ HVRIEELEAA
ARSVCEPYFT RPLSQISLAE VLMKLFHVAR RYQLTLQPQL ILLQKTLLNI EGVGRQLDPE
LDIWVVARPV LERILRARYS PRHALKELNK RLPEIMTHAP DTPRLIHTWL VQQVESRKQN
DVYLQQIRAL AMTLQGLQRR VVNAIVGSGL LVAAAVLYGL HPDGLYLGTI PVWSLISGCV
GALALFSAWW RS
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