| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1185 |
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| Symbol | |
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| ID | 6120405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1249948 |
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| End bp | 1250967 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649204 |
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| Product | phage-related integrase |
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| Protein accession | YP_001775766 |
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| Protein GI | 170730333 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGTA AGCCAATCAA AGCAGGTGCG ATTCCGAGGT TTCGCGTGCG CCCTCAGAAG
TCCGGCGTGG TGTATTACTA CTACGATCAT GGCGGCAAGC CACGCAAAGA GACGCCACTG
GGACGCGACT ACGGTTTAGC CATAAAGCGG TGGGCTGAGC TGGAGCATGC GCAGATCACT
CCTGCAATTG CGGTAACGTT TCGCCATGTG GCCGAGCGTT ACCGCGCTGA GGTGATCCCG
ACAAAGGCCC GCAGTACGCA ACAGATGCAT CACATCTATT TGAACTACCT GTTGCAGTTT
TTTGACGATC CCCCCGCGCC GTTTGAGGCT ATTAGGCCGG TAGACATCCG TAAGTATCTA
GATTGGCGGC CCTTTAAGGT AAGCGCTAAT CGTGAGATAT CCGTATTTTC ACATATTTGG
AATTGGGCGC GGAGTAAGGG GATTACTGAT CTCGCCAACC CTTGTGCGGG CATCCGTCGT
AATAAAGAGT CAGGCCGCGA TGTATACATA GACGATGCAA CGTACCGCGC TGTGTACCAA
GCAGCGGATC AAACGCTCAG GGATGCAATG GACCTCGCCT ACCTGACGGG ACAGCGTGTA
AGTGATGTTC TATCTATGGA TGAGCGCCAT ATTGTTAATG GCGCTTTGGA GATTTGCCAA
GCTAAAACAG GTGCGAAATT AGCGATTGCG ATTACGGGTG AGTTAGCAGT TTTAATAAAG
CGTATTTTTG ATCACAAGCG GGGGTTAAAG CTGCGTAGTA CACGTTTGAT TGTGGATGAA
AAAGGCTTTG GGCTAGGTTG CATGGCGCTG CGCTACAGGT TCAAGAAGGC GCGTGCTGCC
GCAGGGATCG CCAAGCAGGC ATTCCAATTC CGTGATCTAC GCGCCAAAGC GGCGACCGAT
AAGGCGGATT TGGCGGGCGA TATACGCCAA GCGCAAGCAC AGTTGGGCCA TACCTCGGTG
GTGATGACAG AGCACTATGT ACGTAAACGC AAAGGAGCGA AGGTGACACC TACGCGGTGA
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| Protein sequence | MGRKPIKAGA IPRFRVRPQK SGVVYYYYDH GGKPRKETPL GRDYGLAIKR WAELEHAQIT
PAIAVTFRHV AERYRAEVIP TKARSTQQMH HIYLNYLLQF FDDPPAPFEA IRPVDIRKYL
DWRPFKVSAN REISVFSHIW NWARSKGITD LANPCAGIRR NKESGRDVYI DDATYRAVYQ
AADQTLRDAM DLAYLTGQRV SDVLSMDERH IVNGALEICQ AKTGAKLAIA ITGELAVLIK
RIFDHKRGLK LRSTRLIVDE KGFGLGCMAL RYRFKKARAA AGIAKQAFQF RDLRAKAATD
KADLAGDIRQ AQAQLGHTSV VMTEHYVRKR KGAKVTPTR
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