Gene Xfasm12_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1166 
Symbol 
ID6119691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1237936 
End bp1238637 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID641649185 
Productphage-related repressor protein 
Protein accessionYP_001775747 
Protein GI170730314 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000408495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTC TTAATTCTGC TACCGTTGCC TTACGTAGAC GTCGCCTAAA ACAATGGATT 
CAAGATCAGC ACGACGGTGT GCAAGCTTTT TTCGTAGAAA AAATTAGTAT CAATCAGGGA
GAACTTTCCG GACTACTCAA TGGGAAAAAG TCATTCGGCG AGAAAAAAGC ACGGACTATC
GAAAAGTTAG CAGGTATGCC AGATAACTAT TTAGACACCA CAGAAGAGGA GATTCCTGAG
AAACAGAAAT CATCAACATT TAACATTAAA ACTGGGAACA ATTATATCCG CGTTGATCAT
ATTGAAGCGG AAGCACATAT GGGACAAGGT CGTATCAATG AGGATTTACC TGAAGTTATA
AACTCTGTTG AGTTCCCACC AAATTACATC CGCTCACTCA TTGGATTCTT ACCACCACCA
GGCCGACTCA AGCTGATTAC CGGAACCGGT AATTCAATGT CGCCAAAGAT TCTTCCAGGA
GAAACCGTGC TTGTTGATAC TGGTTGCAAT ACGTTTGTTG GGGATGGGCT TTACCTAGTC
AATACAGGTA ACGGACAACA AATAAAAGCA TTACATGATA GAAACGGATA CATATACATT
ACCAGCATGG ATAAAGCTCT TTATCCTGAC TTCGTTGCCG ATGAAAATAC AATTATTGGT
GGGCGCGTTT ATCTCATTCA GCACTTAGAA AGAGTTTCTT GA
 
Protein sequence
MTFLNSATVA LRRRRLKQWI QDQHDGVQAF FVEKISINQG ELSGLLNGKK SFGEKKARTI 
EKLAGMPDNY LDTTEEEIPE KQKSSTFNIK TGNNYIRVDH IEAEAHMGQG RINEDLPEVI
NSVEFPPNYI RSLIGFLPPP GRLKLITGTG NSMSPKILPG ETVLVDTGCN TFVGDGLYLV
NTGNGQQIKA LHDRNGYIYI TSMDKALYPD FVADENTIIG GRVYLIQHLE RVS