Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1166 |
Symbol | |
ID | 6119691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1237936 |
End bp | 1238637 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641649185 |
Product | phage-related repressor protein |
Protein accession | YP_001775747 |
Protein GI | 170730314 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000408495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTC TTAATTCTGC TACCGTTGCC TTACGTAGAC GTCGCCTAAA ACAATGGATT CAAGATCAGC ACGACGGTGT GCAAGCTTTT TTCGTAGAAA AAATTAGTAT CAATCAGGGA GAACTTTCCG GACTACTCAA TGGGAAAAAG TCATTCGGCG AGAAAAAAGC ACGGACTATC GAAAAGTTAG CAGGTATGCC AGATAACTAT TTAGACACCA CAGAAGAGGA GATTCCTGAG AAACAGAAAT CATCAACATT TAACATTAAA ACTGGGAACA ATTATATCCG CGTTGATCAT ATTGAAGCGG AAGCACATAT GGGACAAGGT CGTATCAATG AGGATTTACC TGAAGTTATA AACTCTGTTG AGTTCCCACC AAATTACATC CGCTCACTCA TTGGATTCTT ACCACCACCA GGCCGACTCA AGCTGATTAC CGGAACCGGT AATTCAATGT CGCCAAAGAT TCTTCCAGGA GAAACCGTGC TTGTTGATAC TGGTTGCAAT ACGTTTGTTG GGGATGGGCT TTACCTAGTC AATACAGGTA ACGGACAACA AATAAAAGCA TTACATGATA GAAACGGATA CATATACATT ACCAGCATGG ATAAAGCTCT TTATCCTGAC TTCGTTGCCG ATGAAAATAC AATTATTGGT GGGCGCGTTT ATCTCATTCA GCACTTAGAA AGAGTTTCTT GA
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Protein sequence | MTFLNSATVA LRRRRLKQWI QDQHDGVQAF FVEKISINQG ELSGLLNGKK SFGEKKARTI EKLAGMPDNY LDTTEEEIPE KQKSSTFNIK TGNNYIRVDH IEAEAHMGQG RINEDLPEVI NSVEFPPNYI RSLIGFLPPP GRLKLITGTG NSMSPKILPG ETVLVDTGCN TFVGDGLYLV NTGNGQQIKA LHDRNGYIYI TSMDKALYPD FVADENTIIG GRVYLIQHLE RVS
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