| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1150 |
|---|
| Symbol | |
|---|
| ID | 6119675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1223880 |
|---|
| End bp | 1225754 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641649170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775732 |
|---|
| Protein GI | 170730299 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG CCACTGAGGT AGTACGGGAC CTTCGCAAAG GCGGCACCCA GTACCGCAAT
GCCGATGTCC TATCGATAGA CGAACCCTCC AGAACCCTTG AACTTGCATT TAGCAGCGAA
GCAGCAGAAG TACAAACATG GTCCGGCGTG GAGATTCTCG GCCACCGCCC CGGCGAAGTG
CGCCTGCACC GTCTTGGCGA CAGCGCGGCG TTATTACTGG ACCACAACCC GCGCGATCAA
ATCGGTGTCG TCCAATCAGC GTCTATCGAC CGCGACCAAC GCGGACGCGC CATCGTGCGC
TTCGGGCGCA GCCCACGTGC TGAAGAAATC CTACGTGATG TCCTGGACGG CATCCGTAAA
CACGTCTCAG TGGGCTATTT GGTCCATCAA GTCGAAGTGA TCGGCCAACG CGACGCAGGC
CCCCTGTACC GCGCCACGGA CTGGGAGCCC ATTGAAATCT CCATTGTCAG CATCCCTGCC
GACCCCTCCG TCGGCATCGG GCGCGCCTTG GAAAATCCGC CACAGGACAC CGCAACAGTC
TCGCAACACA CTCCAGGCAC CCCTGAGGAT AAAACCATGA CGGAACCATC AACCCCCGCC
CATGCCGACA CCACCAACAC ACCCCAGCCG ACATCCAACG CGACTGACAC CCCCAACAGC
GTCGATGCCG AACGTACCCG TGTCAGACAC ATTGCTGACC TTGGCAAAAC CTACGGGCAC
CTGGAACTGG CGCACGACTA CATTACCCAA GGCCAATCAC CGGAAGCATT CCAGCGCGCC
CTACTGACAA AACTGACGGA CAAAGCACCC ATGCCCCAGT CCGAACCCCA CACACAGACC
GGCATCGGCC TGTCCACACA AGAAATACGG CACTACAGCA TCGTCCGCGC GATCCGCGCG
TTATTGCCTA ATGCCAGCCA GACCGACCGC AACGCGGCGG CCTTTGAGAT TGCCTGCTCC
GCTGCCGCAG AAAAAACCTA CGGCAAACAG GCGCGCGGCC TACTGATCCC CTCGGACGTC
CTGAACCGCG CATTCTCCAC CACCACCCCG ACGGACGGCC CCGGCGGCAA CATCATTGCC
ACCGAACTAC ACGCCTCCTC CTTTATCGAA ATACTGCGTA ATAAAACCTG GGTCATGCAG
CGCGCTACCG TCATGGGCGG CCTGGTTGGC AACGTCGATA TCCCTAGACA GAAAGGCACC
ACCCAAGCCT ACTGGGTGGG GGAAGGCGAA TCACCGGAAA AAAGCAAACC TGCCCTGGAC
CAAATCCACT TCAGCCCCAA ATCACTAGCC GCCTATACCG ACATCACCCG GCGTCTGCTC
CTGCAATCCA CCCCGGATGC CGAACAGATC GTACGCAGCG ACCTACTGAA CGTCATGGCC
CTGGAAGTGG ACCGTGCCGC CATCTACGGC AGCGGCTCAG ACATGCAACC CACAGGCGTT
AAACATCACA GCGGCATTAA CGCCGTGTCC TTTGCACAAA AAGGGCAACC CTCATTTGCT
GAACTTGTCC AGATGGAAAC GCAAATTGCA CTGAACAACG CAGATGTGAA CGCCATGTCC
TACGCCTTCA ATGCGGGCAT ACGTGGCTAT GCCAAAACCG CCTTGAAGTT TCCCCAGACC
GCCGCCAGCG GCACGATTTG GGAATCCGGC AACACCGTCA ACGGCTACCC AGCCAGCGTG
TCCAACCAGA TTAAGGCCGG TGACGTCTTC TTTGGGAACT GGGCGGACCT CATCATTGCC
ATGTGGGGAG GCTTAGATAT CACCGTCGAC CCCTACAGCC TCAGCACCAG CGGCGGCACC
CGGATTGTCG TGTTTCAAGA TGTCGACTTT AACATCCGTC GTACCGAAAG CTTCTGCTAC
GGCGCAGCCG CCTGA
|
|---|
| Protein sequence | MTTATEVVRD LRKGGTQYRN ADVLSIDEPS RTLELAFSSE AAEVQTWSGV EILGHRPGEV
RLHRLGDSAA LLLDHNPRDQ IGVVQSASID RDQRGRAIVR FGRSPRAEEI LRDVLDGIRK
HVSVGYLVHQ VEVIGQRDAG PLYRATDWEP IEISIVSIPA DPSVGIGRAL ENPPQDTATV
SQHTPGTPED KTMTEPSTPA HADTTNTPQP TSNATDTPNS VDAERTRVRH IADLGKTYGH
LELAHDYITQ GQSPEAFQRA LLTKLTDKAP MPQSEPHTQT GIGLSTQEIR HYSIVRAIRA
LLPNASQTDR NAAAFEIACS AAAEKTYGKQ ARGLLIPSDV LNRAFSTTTP TDGPGGNIIA
TELHASSFIE ILRNKTWVMQ RATVMGGLVG NVDIPRQKGT TQAYWVGEGE SPEKSKPALD
QIHFSPKSLA AYTDITRRLL LQSTPDAEQI VRSDLLNVMA LEVDRAAIYG SGSDMQPTGV
KHHSGINAVS FAQKGQPSFA ELVQMETQIA LNNADVNAMS YAFNAGIRGY AKTALKFPQT
AASGTIWESG NTVNGYPASV SNQIKAGDVF FGNWADLIIA MWGGLDITVD PYSLSTSGGT
RIVVFQDVDF NIRRTESFCY GAAA
|
|---|
| |