| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1109 |
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| Symbol | |
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| ID | 6119634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1188157 |
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| End bp | 1189749 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649133 |
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| Product | fumarate hydratase |
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| Protein accession | YP_001775695 |
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| Protein GI | 170730262 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00489868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATCC TATGGCTGAT GTATTCAGGG GGATTACAAT GGCAACGTTT TTTAGTCAGC
CATAAGGGCC AGCCGGTGTC ATTGATCAAA CAAGAAGACT TTATCCAGTC CATCGCTGAT
GCGCTGCAAT ACATCAGTTA CTACCATCCG GTCGATTACA TCAAGAATCT GGCTTTGGCG
TATGAGTGCG AGAAATCGCC CGCCGCTAAA GATGCAATGG CGCAGATTTT GATTAACTCA
CGTATGTGTG CTGAGGGGCG CCGCCCGATT TGCCAAGATA CAGGGATTGT CACGGTGTTC
CTTAGCATCG GGATGGATGT ACGTTGGGAT GACGTCACGA TGGATGTGGA AGAGATGGTG
AATGAGGGGG TTCGCCGTGC CTATCGTCAT CCGGATAACA CGCTACGTGC GTCTGTGCTT
GCTGATCCTG CCGGCAAGCG CTGCAATACG AGGGACAATA CGCCAGCAGT CGTTAACGTC
AAGGTTGTTT CTGGGGGCCA TGTTGAAGTG ATTGTTGCTG CCAAGGGAGG GGGATCGGAG
GCCAAGAGCA AATTTGCAAT GCTAAATCCA TCGGATTCCA TCGTTGATTG GGTTCTGGAC
ACTGTGCCAA CCATGGGGGC TGGCTGGTGC CCACCAGGGA TGCTTGGGAT TGGTATCGGT
GGTACGGCTG AGAAAGCGAT GCTGCTCGCT AAGGAAGCGT TGATGGAACC GATTGACATC
CAGGATTTGA TGGTACGCGG CCCTTCCAAT CGTGCTGAAG AATTACGCTT GGAGCTGTAC
GAGAAGGTCA ATGCTTTAGG GATCGGTGCT CAGGGGGTGG GCGGGATGAC GACGGTATTA
GACATTAAAG TCAAAGATTA TCCGACGCAT GCTGCCAATT TACCGGTAGC GATGATCCCT
AATTGTGCGT CCACACGCCA TGCGCATTTC ACATTGGACG GTAGCGGTTC TGTTGTTCTG
GAACCGCCGT CATTAGAGGA TTGGCCTAAG TTGAGCTATC TCCCGGAGTC TGCCCGCCAG
GTGGATTTGA ATACGATCAC CAGGGATGAG GTGGCGCAGT TCAAACCAGG TGAGGTGTTG
CTACTCAGCG GCAAATTGTT GACGGGGCGA GATGCTGCGC ATAAGCGCAT CGTTGAGATG
CTCAACAAGG GGGAGACATT ACCAGTTGAT TTCACGAATC GCTTTATCTA CTACGTGGGT
CCGGTGGATC CTGTGCGTGA TGAAGTCGTC GGTCCTGCGG GTCCAACCAC AGCAACGCGT
ATGGATAAGT TTACGCGTCA GATGCTGGAG CAGGGCGGGT TGCTCGGTAT GGTGGGCAAG
GCCGAGCGTG GTCCTACTGC CATCGCTGCA ATCCGTGACA ACAAAGCAGT GTATCTGATG
GCGGTGGGAG GGGCGGCTTA TCTTGTCTCC AAGGCGATCA AAACGAGCCG GATACTGGCT
TTTGAAGACC TTGGCATGGA GGCAATTTAT GAGTTTGAAG TCAAGGAGAT GCCTGTAACA
GTGGCGGTTG ATTGCAACGG TGAGTCGATA CATACAACTG GGCCGCGTGA GTGGCGAAGC
CGGATCGGGA AAATTCCGGT TGTTGTGGAG TAG
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| Protein sequence | MFILWLMYSG GLQWQRFLVS HKGQPVSLIK QEDFIQSIAD ALQYISYYHP VDYIKNLALA
YECEKSPAAK DAMAQILINS RMCAEGRRPI CQDTGIVTVF LSIGMDVRWD DVTMDVEEMV
NEGVRRAYRH PDNTLRASVL ADPAGKRCNT RDNTPAVVNV KVVSGGHVEV IVAAKGGGSE
AKSKFAMLNP SDSIVDWVLD TVPTMGAGWC PPGMLGIGIG GTAEKAMLLA KEALMEPIDI
QDLMVRGPSN RAEELRLELY EKVNALGIGA QGVGGMTTVL DIKVKDYPTH AANLPVAMIP
NCASTRHAHF TLDGSGSVVL EPPSLEDWPK LSYLPESARQ VDLNTITRDE VAQFKPGEVL
LLSGKLLTGR DAAHKRIVEM LNKGETLPVD FTNRFIYYVG PVDPVRDEVV GPAGPTTATR
MDKFTRQMLE QGGLLGMVGK AERGPTAIAA IRDNKAVYLM AVGGAAYLVS KAIKTSRILA
FEDLGMEAIY EFEVKEMPVT VAVDCNGESI HTTGPREWRS RIGKIPVVVE
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