| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1107 |
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| Symbol | |
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| ID | 6119632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1184981 |
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| End bp | 1185673 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649131 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001775693 |
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| Protein GI | 170730260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
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| TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000696721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG CTGTTATCTT GTTATCCGGA GGTATGGACT CTGCTGTGGT CACCGCCATC
GCCCAATCGC AGGGATTTAT GGTGCACGCT TTAAGCATAC GTTACGGTCA GCGCCATACT
TCCGAGTTGG ACGCAGCCGT ACGGATCGCC AGGGCGCTAA ACGTGGTTGC ACATAAAGTT
GTGGACGTGG ATCTACGCAG CATCGGTGGT TCGGCACTGA CTGACGACAT CGAAATACCA
GACGCAGGTG GCGAGGGTAT TCCCGTGACC TATGTGCCAG CACGTAATAC CATCATGCTG
TCACTCGCAT TAGGTTGGGC TGAAGTCATC GGTGCGGCCG ATATATTCTG CGGTGTTAAC
GCCGTTGATT ATTCAGGTTA TCCCGATTGC CGCCCGCAGT TCATCACGGC CTTCGAAACG
CTAGCTAATC TGGCAACCAA AGTCGGCGTT GAGGGGACTC AGTTACACGT ACATGCGCCA
TTACAGTTTC TCAGTAAGGC GGAGATTGTT CACGAAGGTC TGCTGCATGG CGTGGACTTT
GGATTGACCG TGTCTTGTTA TCGTGCAGAT GTTGACGGGC GCGCTTGTGG GCGCTGCGAC
GCTTGCAAAC TACGTGCGGC CGGATTCGCG GATGCTGGTG TCGTCGACCC GACTCGCTAT
ATGGAGTTAC CTTGCTCGTT ACTCTTGCTG TAA
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| Protein sequence | MKKAVILLSG GMDSAVVTAI AQSQGFMVHA LSIRYGQRHT SELDAAVRIA RALNVVAHKV
VDVDLRSIGG SALTDDIEIP DAGGEGIPVT YVPARNTIML SLALGWAEVI GAADIFCGVN
AVDYSGYPDC RPQFITAFET LANLATKVGV EGTQLHVHAP LQFLSKAEIV HEGLLHGVDF
GLTVSCYRAD VDGRACGRCD ACKLRAAGFA DAGVVDPTRY MELPCSLLLL
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